RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 CLEC4MQ9H2X3 399 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 LIME1Q9H400 295 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 COQ10BQ9H8M1 238 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 RASSF1Q9NS23 344 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 CCDC167Q9P0B6 97 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLC35A3Q9Y2D2 325 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 EMC9Q9Y3B6 208 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 PCDHB14Q9Y5E9 798 aa11.49□□□□□ -0.57
TRAPPC4-205ENST00000525079 SH3D21A4FU49 640 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 AGAP5A6NIR3 686 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 NR5A2O00482 541 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 AP3D1O14617 1153 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 DNAJA2O60884 412 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 ADAM11O75078 769 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 SS18L1O75177 396 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 BCHEP06276 602 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 POU2F1P14859 743 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 CCNA2P20248 432 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLC7A1P30825 629 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 CD79BP40259 229 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 DSTNP60981 165 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 TXNL4AP83876 142 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 SELENBP1Q13228 472 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 DAZAP2Q15038 168 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 POU4F3Q15319 338 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZNF239Q16600 458 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 AGKQ53H12 422 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 RPS26P11Q5JNZ5 115 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 AP1ARQ63HQ0 302 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 ANKRD34AQ69YU3 496 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 PLEKHM3Q6ZWE6 761 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 ARFGAP2Q8N6H7 521 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 FAM71CQ8NEG0 241 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 ABHD3Q8WU67 409 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 WDR60Q8WVS4 1066 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 TMEM234Q8WY98 164 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 ST8SIA1Q92185 356 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 REXO5Q96IC2 774 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 OR5B2Q96R09 309 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 C12orf49Q9H741 205 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 MTHFD2LQ9H903 347 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 TIGARQ9NQ88 270 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 CTPS2Q9NRF8 586 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 SERINC1Q9NRX5 453 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 ACER3Q9NUN7 267 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 KLHL28Q9NXS3 571 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 P2RX2Q9UBL9 471 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 DCTN4Q9UJW0 460 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 CREBBPQ92793 2442 aa11.48□□□□□ -0.57
TRAPPC4-205ENST00000525079 POLQO75417 2590 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 FAM221AA4D161 298 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 CLIC1O00299 241 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 ETV2O00321 342 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 NUDT7P0C024 238 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 TFPTP0C1Z6 253 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 TFPIP10646 304 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 CD8BP10966 210 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 IL7RP16871 459 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 NCF2P19878 526 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 KLK2P20151 261 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 ENPP1P22413 925 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 IDH2P48735 452 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 MRPL19P49406 292 aaKnown RBP11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 PAGE3Q5JUK9 113 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 BLOC1S3Q6QNY0 202 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 FCRLAQ7L513 359 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZNF550Q7Z398 422 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 VRK2Q86Y07 508 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 CDC20BQ86Y33 519 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 TUSC5Q8IXB3 177 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 OR6K3Q8NGY3 331 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 RNF128Q8TEB7 428 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLC38A5Q8WUX1 472 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 CPNE4Q96A23 557 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 SPDL1Q96EA4 605 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 DACH2Q96NX9 599 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 WFIKKN1Q96NZ8 548 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLC39A3Q9BRY0 314 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 KLHL4Q9C0H6 718 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 NPHS2Q9NP85 383 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 PLSCR4Q9NRQ2 329 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZNF446Q9NWS9 450 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLC25A37Q9NYZ2 338 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLAMF8Q9P0V8 285 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 NDRG3Q9UGV2 375 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 MPDZO75970 2070 aa11.47□□□□□ -0.57
TRAPPC4-205ENST00000525079 A0A096LPI6 279 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 CASKO14936 926 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 EDF1O60869 148 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 DBIP07108 87 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 NID1P14543 1247 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 HOXB9P17482 250 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 RPS4Y1P22090 263 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 AGTR1P30556 359 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 DNAJA1P31689 397 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 UGT2B10P36537 528 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 SF3A3Q12874 501 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 SQLEQ14534 574 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 RGNQ15493 299 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms