RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 NOP53Q9NZM5 478 aaKnown RBP16.66■□□□□ 0.26
PTP4A3-206ENST00000524028 RNF115Q9Y4L5 304 aa16.66■□□□□ 0.26
PTP4A3-206ENST00000524028 RNF103-CHMP3A0A140T963 221 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 INAFM1C9JVW0 142 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 OVOL3O00110 214 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 SCN2BO60939 215 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 BCAS1O75363 584 aaPredicted RBP16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 STX11O75558 287 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 CYP7B1O75881 506 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 DANCRP0C864 163 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 OR3A2P47893 321 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 SESN3P58005 492 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 PHC1P78364 1004 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 MAD2L1Q13257 205 aaPredicted RBP16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 TNK1Q13470 666 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 P2RY6Q15077 328 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 PDCD2Q16342 344 aaPredicted RBP16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 MAPK14Q16539 360 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 NUDCD3Q8IVD9 361 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 ZNF781Q8N8C0 355 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 TRIM44Q96DX7 344 aaPredicted RBP16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 SLC35G5Q96KT7 338 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 OR5B2Q96R09 309 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 C20orf27Q9GZN8 174 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 ZNF350Q9GZX5 532 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 OR51I1Q9H343 314 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 AKTIPQ9H8T0 292 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 KLHL9Q9P2J3 617 aa16.65■□□□□ 0.26
PTP4A3-206ENST00000524028 WDR91A4D1P6 747 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 DPRXA6NFQ7 191 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 DUXAA6NLW8 204 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 KIAA1324LA8MWY0 1029 aaPredicted RBP16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 RNASET2O00584 256 aaKnown RBP16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 CYTIPO60759 359 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 AK1P00568 194 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 CSTAP01040 98 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 CD3EP07766 207 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 RPS4XP62701 263 aaKnown RBP16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 RASGEF1BQ0VAM2 473 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 SMU1Q2TAY7 513 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 HEPHL1Q6MZM0 1159 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 C3orf33Q6P1S2 294 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 Q6ZT83 130 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 BHLHA15Q7RTS1 189 aaPredicted RBP16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 OR8J2Q8NGG1 315 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 OR4A15Q8NGL6 344 aa16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 PIWIL2Q8TC59 973 aaKnown RBP16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 ESRP2Q9H6T0 727 aaKnown RBP16.64■□□□□ 0.25
PTP4A3-206ENST00000524028 NUP214P35658 2090 aaPredicted RBP16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 HIVEP2P31629 2446 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 LYZL6O75951 148 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 C1QCP02747 245 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 UBTFL6P0CB48 400 aaPredicted RBP16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 OR12D1P0DN82 309 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 DIO1P49895 249 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 BSPH1Q075Z2 132 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 KRTAP1-1Q07627 177 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 FUT5Q11128 374 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 MERTKQ12866 999 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 ZNF672Q499Z4 452 aaPredicted RBP16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 TYW3Q6IPR3 259 aaKnown RBP16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 ANKRD46Q86W74 232 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 LSRQ86X29 649 aaPredicted RBP16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 KBTBD8Q8NFY9 601 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 MIPOL1Q8TD10 442 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 SMAP2Q8WU79 429 aaPredicted RBP16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 ST8SIA1Q92185 356 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 RAB8BQ92930 207 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 FBXW5Q969U6 566 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 ZG16BQ96DA0 208 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 TMEM109Q9BVC6 243 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 POTEKPQ9BYX7 375 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 NGBQ9NPG2 151 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 ACER3Q9NUN7 267 aa16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 MAGED1Q9Y5V3 778 aaPredicted RBP16.63■□□□□ 0.25
PTP4A3-206ENST00000524028 FREM1Q5H8C1 2179 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 ZNF724A8MTY0 619 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 ANKRD28O15084 1053 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 FESP07332 822 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 IGHV1-2P23083 117 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 PGM1P36871 562 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 ABCE1P61221 599 aaKnown RBP16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 PLAURQ03405 335 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 CHI3L2Q15782 390 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 PGGHGQ32M88 737 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 TMPPEQ6ZT21 453 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 EIF3MQ7L2H7 374 aaKnown RBP16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 C16orf62Q7Z3J2 963 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 HMGN2P46Q86SG4 172 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 FAM71CQ8NEG0 241 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 XAGE5Q8WWM1 108 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 ZIM3Q96PE6 472 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 SORT1Q99523 831 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 TRIM2Q9C040 744 aa16.62■□□□□ 0.25
PTP4A3-206ENST00000524028 PRAMEF27A3QJZ7 478 aa16.61■□□□□ 0.25
PTP4A3-206ENST00000524028 KIAA0513O60268 411 aa16.61■□□□□ 0.25
PTP4A3-206ENST00000524028 RAMP1O60894 148 aa16.61■□□□□ 0.25
PTP4A3-206ENST00000524028 CPSF4O95639 269 aaKnown RBP16.61■□□□□ 0.25
PTP4A3-206ENST00000524028 SERPINE1P05121 402 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms