RNA–Protein interactions for RNA: ENST00000523270.1

CNOT8-223, Transcript of CCR4-NOT transcription complex subunit 8, human

TSL 4

Gene CNOT8, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT8-223	ENST00000523270	HRNR	Q86YZ3	2850 aa	Predicted RBP	18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	CREBBP	Q92793	2442 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	TRBV5-3	A0A0A0MS03	114 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270		A0A1W2PNR3	127 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	CGA	P01215	116 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	CRH	P06850	196 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	MAGEA8	P43361	318 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	GUCY1A3	Q02108	690 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	SELENBP1	Q13228	472 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	PLEKHM3	Q6ZWE6	761 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	VRK2	Q86Y07	508 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	WDR60	Q8WVS4	1066 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	ROBO4	Q8WZ75	1007 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	ST8SIA1	Q92185	356 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	MAL2	Q969L2	176 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	ZNF559	Q9BR84	538 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	TMEM120A	Q9BXJ8	343 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	PIGM	Q9H3S5	423 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	IKZF5	Q9H5V7	419 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	MTHFD2L	Q9H903	347 aa	Predicted RBP	18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	MCCC2	Q9HCC0	563 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270	ACER3	Q9NUN7	267 aa		18.37	■□□□□ 0.53
CNOT8-223	ENST00000523270		A8MXE2	369 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	SMNDC1	O75940	238 aa	Known RBP eCLIP	18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	PGC	P20142	388 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	KLK2	P20151	261 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	KIR2DL3	P43628	341 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	CPA2	P48052	419 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	MERTK	Q12866	999 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	ZNF239	Q16600	458 aa	Known RBP	18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	MRPL2	Q5T653	305 aa	Known RBP	18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	ZNF474	Q6S9Z5	364 aa	Predicted RBP	18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	ZNF836	Q6ZNA1	936 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	RETREG3	Q86VR2	466 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	ARFGAP2	Q8N6H7	521 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	LINC01560	Q8TB33	94 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	EXOSC3	Q9NQT5	275 aa	Known RBP	18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	RLIM	Q9NVW2	624 aa		18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	FOXD3	Q9UJU5	478 aa	Predicted RBP	18.36	■□□□□ 0.53
CNOT8-223	ENST00000523270	AKAP9	Q99996	3911 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	SYNGR4	O95473	234 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	FCGR2A	P12318	317 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	BMP2	P12643	396 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	CPOX	P36551	454 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	CARD18	P57730	90 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	DLEU7	Q6UYE1	221 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	LRRC46	Q96FV0	321 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	CCDC106	Q9BWC9	280 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	RSPO3	Q9BXY4	272 aa	Predicted RBP	18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	PRRG4	Q9BZD6	226 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	CTPS2	Q9NRF8	586 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	TMEM45A	Q9NWC5	275 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	MCTS1	Q9ULC4	181 aa	Known RBP	18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	CHST2	Q9Y4C5	530 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	FREM1	Q5H8C1	2179 aa		18.35	■□□□□ 0.53
CNOT8-223	ENST00000523270	IGHV3-15	A0A0B4J1V0	119 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270		A0A1W2PP18	115 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	MSTN	O14793	375 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	DBI	P07108	87 aa	Known RBP	18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	IL7R	P16871	459 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	CRISP3	P54108	245 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	IRX1	P78414	480 aa	Predicted RBP	18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	PDSS1	Q5T2R2	415 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	C3orf33	Q6P1S2	294 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	CMIP	Q8IY22	773 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	PEX5L	Q8IYB4	626 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	OR52P1P	Q8NH57	321 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	ZNF563	Q8TA94	476 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	ABHD3	Q8WU67	409 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	SIKE1	Q9BRV8	207 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	A4GALT	Q9NPC4	353 aa		18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	PAQR5	Q9NXK6	330 aa	Predicted RBP	18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	ZNF443	Q9Y2A4	671 aa	Predicted RBP	18.34	■□□□□ 0.53
CNOT8-223	ENST00000523270	SPG11	Q96JI7	2443 aa		18.33	■□□□□ 0.53
CNOT8-223	ENST00000523270	AKAP6	Q13023	2319 aa		18.33	■□□□□ 0.53
CNOT8-223	ENST00000523270	SS18L1	O75177	396 aa	Predicted RBP	18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	GKN3P	P0CG01	181 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	CCKAR	P32238	428 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	IDH2	P48735	452 aa	Known RBP	18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	EEF1A1	P68104	462 aa	Known RBP	18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	SORD	Q00796	357 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	FAM27E3	Q08E93	113 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	EPS8	Q12929	822 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	FADD	Q13158	208 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	FAM214B	Q7L5A3	538 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	CLIP4	Q8N3C7	705 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	ZNF610	Q8N9Z0	462 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	RNF128	Q8TEB7	428 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	TMEM234	Q8WY98	164 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	DNAJA3	Q96EY1	480 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	GMPPA	Q96IJ6	420 aa	Predicted RBP	18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	CPPED1	Q9BRF8	314 aa	Predicted RBP	18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	RAD21L1	Q9H4I0	556 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	CALML5	Q9NZT1	146 aa		18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	ANKRD17	O75179	2603 aa	Known RBP	18.33	■□□□□ 0.52
CNOT8-223	ENST00000523270	ABCA4	P78363	2273 aa		18.32	■□□□□ 0.52
CNOT8-223	ENST00000523270	CDHR4	A6H8M9	788 aa		18.32	■□□□□ 0.52
CNOT8-223	ENST00000523270	GJE1	A6NN92	205 aa		18.32	■□□□□ 0.52
CNOT8-223	ENST00000523270	ARAF	P10398	606 aa		18.32	■□□□□ 0.52
CNOT8-223	ENST00000523270	ENPP1	P22413	925 aa		18.32	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms