RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MGAT4DA6NG13 374 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 SMLR1H3BR10 107 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 RGS16O15492 202 aaPredicted RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 SNAI2O43623 268 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 GAGE7O76087 117 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 AHSA1O95433 338 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 CLDN14O95500 239 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 IFNW1P05000 195 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 GAGE12FP0CL80 117 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 GAGE12GP0CL81 117 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 GAGE12IP0CL82 117 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 H2AFXP16104 143 aaPredicted RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 HOXA5P20719 270 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 C21orf33P30042 268 aaPredicted RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 HOXA9P31269 272 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 SLC26A3P40879 764 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 ID1P41134 155 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 PPP1R2P41236 205 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 PKNOX1P55347 436 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 DSTNP60981 165 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 ADARB1P78563 741 aaKnown RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 EFEMP1Q12805 493 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 GAGE1Q13065 139 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 GAGE4Q13068 117 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 FOXE3Q13461 319 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 ICAM4Q14773 271 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 HLA-BQ31612 363 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 KLHL22Q53GT1 634 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 XKR6Q5GH73 641 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 SOHLH1Q5JUK2 328 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 THEM4Q5T1C6 240 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 MFSD14CQ5VZR4 134 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 PRR5LQ6MZQ0 368 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 TRNP1Q6NT89 227 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 PPP1R2P3Q6NXS1 205 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 SLC25A47Q6Q0C1 308 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 GFRALQ6UXV0 394 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 LRRC31Q6UY01 552 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 Q6YL49 198 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 PAGE2Q7Z2X7 111 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 TMEM219Q86XT9 240 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 DNAJC22Q8N4W6 341 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 SLC37A3Q8NCC5 494 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 OR2T12Q8NG77 320 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 FANK1Q8TC84 345 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 SMAP2Q8WU79 429 aaPredicted RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.5□□□□□ -1.85
SKP1-209ENST00000522552 RTP4Q96DX8 246 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 XPO6Q96QU8 1125 aaKnown RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 C7orf50Q9BRJ6 194 aaKnown RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 GBA3Q9H227 469 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 OR51M1Q9H341 326 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 SAV1Q9H4B6 383 aaPredicted RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 BICC1Q9H694 974 aaKnown RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 FNDC4Q9H6D8 234 aaPredicted RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 DMAP1Q9NPF5 467 aaPredicted RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 KRCC1Q9NPI7 259 aaPredicted RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 RCOR3Q9P2K3 495 aaPredicted RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 NAGKQ9UJ70 344 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 KCNS2Q9ULS6 477 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 PDE10AQ9Y233 779 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 EXOSC1Q9Y3B2 195 aaKnown RBP3.5□□□□□ -1.85
SKP1-209ENST00000522552 NEDD4P46934 1319 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 FHOD3Q2V2M9 1422 aa3.5□□□□□ -1.85
SKP1-209ENST00000522552 TRBV9A0A0B4J1U6 114 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 CCDC182A6NF36 153 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 PRAMEF26H0Y7S4 382 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 RNASEK-C17orf49H0YIS7 233 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 POLR3AO14802 1390 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 CCNB2O95067 398 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 PRKCGP05129 697 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 HBQ1P09105 142 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 IGHV4-30-4P0DP06 118 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 EFNA1P20827 205 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 CNR1P21554 472 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 UGT1A4P22310 534 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 FEN1P39748 380 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 PLA2G5P39877 138 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 DCDC1P59894 354 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 TUBA4AP68366 448 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 POU3F1Q03052 451 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 ZNF155Q12901 538 aaPredicted RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 GPS2Q13227 327 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 RGS21Q2M5E4 152 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 PTPN20Q4JDL3 420 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 SMUG1Q53HV7 270 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 LY6G5CQ5SRR4 150 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 FNBP1LQ5T0N5 605 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 TIGD3Q6B0B8 471 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 RHBDF2Q6PJF5 856 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 LRRC74BQ6ZQY2 392 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 Q6ZTK2 550 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 PLD3Q8IV08 490 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 APRG1Q8IVJ8 170 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ZNF100Q8IYN0 542 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 DND1Q8IYX4 353 aaKnown RBP3.49□□□□□ -1.85
SKP1-209ENST00000522552 SYS1Q8N2H4 156 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 TRAM1L1Q8N609 369 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 ARFGAP1Q8N6T3 406 aa3.49□□□□□ -1.85
SKP1-209ENST00000522552 OR4D9Q8NGE8 314 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms