RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PAPPAQ13219 1627 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 METRNLQ641Q3 311 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 OR13F1Q8NGS4 319 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 OR4K13Q8NH42 304 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 TRMT10AQ8TBZ6 339 aaKnown RBP15.14■□□□□ 0.01
USP42-207ENST00000521713 MYO18AQ92614 2054 aaKnown RBP15.14■□□□□ 0.01
USP42-207ENST00000521713 CDS1Q92903 461 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 TXNDC15Q96J42 360 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 OR5B2Q96R09 309 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 KIR3DX1Q9H7L2 352 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 FGF22Q9HCT0 170 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 SULT2B1O00204 365 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 LCMT2O60294 686 aaKnown RBP15.14■□□□□ 0.01
USP42-207ENST00000521713 AIFM1O95831 613 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 SFTPBP07988 381 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 TUBG1P23258 451 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 CDK2P24941 298 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 DAP3P51398 398 aaKnown RBP15.14■□□□□ 0.01
USP42-207ENST00000521713 RBPJQ06330 500 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 ARL6IP1Q15041 203 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 CLEC14AQ86T13 490 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 OR6C1Q96RD1 312 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 TTTY10Q9BZA0 68 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 PCDHGA8Q9Y5G5 932 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 LAMB1P07942 1786 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 RGS6P49758 472 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 ETV1P50549 477 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 DLX5P56178 289 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 SPIN3Q5JUX0 258 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 DPY19L2P1Q6NXN4 242 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 OR1J4Q8NGS1 313 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 TMEM239Q8WW34 195 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 NINJ1Q92982 152 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 MFFQ9GZY8 342 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 VDAC3Q9Y277 283 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 MMACHCQ9Y4U1 282 aa15.14■□□□□ 0.01
USP42-207ENST00000521713 SIPA1L3O60292 1781 aaPredicted RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 A0A1W2PQ09 198 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 CSF1P09603 554 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 PKLRP30613 574 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 ETV6P41212 452 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 TSFMP43897 325 aaKnown RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 CAMLGP49069 296 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 ERVK-25P63136 954 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 MC2RQ01718 297 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 EEF1A2Q05639 463 aaKnown RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 SPCS2Q15005 226 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 ESCO2Q56NI9 601 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 IL17RCQ8NAC3 791 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 TMEM30AQ9NV96 361 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 SLC7A7Q9UM01 511 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 ADAMTS7Q9UKP4 1686 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 H3BML4 177 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 TSPAN15O95858 294 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 UBBP0CG47 229 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 UBCP0CG48 685 aaKnown RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 RAP2BP61225 183 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 RPS27AP62979 156 aaKnown RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 UBA52P62987 128 aaKnown RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 NKX6-1P78426 367 aaPredicted RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 EXOSC7Q15024 291 aaKnown RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 CHRFAM7AQ494W8 412 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 SFRP4Q6FHJ7 346 aaPredicted RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 OR5D16Q8NGK9 328 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 FER1L6-AS2Q96M78 137 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 ZNF578Q96N58 590 aaPredicted RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 CDC6Q99741 560 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 VRK1Q99986 396 aaPredicted RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 TMPRSS11EQ9UL52 423 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 F5P12259 2224 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 SSC5DA1L4H1 1573 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 SSX4O60224 188 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 FUT1P19526 365 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 PIN1Q13526 163 aaPredicted RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 CDNFQ49AH0 187 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 AKR1C8PQ5T2L2 129 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 SBSNQ6UWP8 590 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 Q6ZNB5 142 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 CCNL2Q96S94 520 aaPredicted RBP15.13■□□□□ 0.01
USP42-207ENST00000521713 ASF1BQ9NVP2 202 aa15.13■□□□□ 0.01
USP42-207ENST00000521713 CR2P20023 1033 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 TAS2R31P59538 309 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 TGFBR3Q03167 851 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 ZNF616Q08AN1 781 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 TATDN3Q17R31 274 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 MTFR2Q6P444 385 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 CREB3L2Q70SY1 520 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 SLC16A9Q7RTY1 509 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 KIAA1958Q8N8K9 716 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 PDXPQ96GD0 296 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 PRRC1Q96M27 445 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 TREX2Q9BQ50 279 aaPredicted RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 THAP7Q9BT49 309 aaPredicted RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 CFHR5Q9BXR6 569 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 MS4A8Q9BY19 250 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 SLC5A7Q9GZV3 580 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 OR51E2Q9H255 320 aa15.12■□□□□ 0.01
USP42-207ENST00000521713 RPH3AQ9Y2J0 694 aaPredicted RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.12■□□□□ 0.01
USP42-207ENST00000521713 A6NLC8 198 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms