RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 POLR2HP52434 150 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 RAC3P60763 192 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 CDK6Q00534 326 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 FOXF1Q12946 379 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 PATL1Q86TB9 770 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 PTOV1Q86YD1 416 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 RPRMLQ8N4K4 120 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 C9orf106Q8NAJ2 232 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 C11orf65Q8NCR3 313 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 RNASE6Q93091 150 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 TRIB1Q96RU8 372 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 ZNF607Q96SK3 696 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 HOPXQ9BPY8 73 aaPredicted RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 SLAMF8Q9P0V8 285 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 KCNN3Q9UGI6 736 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 ANGPT4Q9Y264 503 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 NPIPA5A0A0B4J1W7 369 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 CFAP73A6NFT4 308 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 C17orf51A8MQB3 221 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 NPIPA7E9PJI5 369 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 MSTNO14793 375 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 TNFSF13O75888 250 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 CGAP01215 116 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 BCHEP06276 602 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 NPIPA8P0DM63 369 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 TMIGD3P0DMS9 266 aaPredicted RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 IL7RP16871 459 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 AGFG1P52594 562 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 MRPL2Q5T653 305 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 INTS11Q5TA45 600 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 SP5Q6BEB4 398 aaPredicted RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 WBP2NLQ6ICG8 309 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 RNF128Q8TEB7 428 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 LRRC58Q96CX6 371 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 ZG16BQ96DA0 208 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 REXO5Q96IC2 774 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 MCTS1Q9ULC4 181 aaKnown RBP8.5□□□□□ -1.05
CLK4-209ENST00000521621 CHST2Q9Y4C5 530 aa8.5□□□□□ -1.05
CLK4-209ENST00000521621 IGKV3D-15A0A087WSY6 115 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 A0A1W2PNV4 684 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 ZNF724A8MTY0 619 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 FAM220BPB1ANY3 271 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 SHOX2O60902 331 aaPredicted RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 SERPINB7O75635 380 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 CNOT4O95628 575 aaKnown RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 SESN3P58005 492 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 GTF3C1Q12789 2109 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 NFYCQ13952 458 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 REP15Q6BDI9 236 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 CHMP1BQ7LBR1 199 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 SSX8Q7RTT4 187 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 DMRTC2Q8IXT2 367 aaPredicted RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 ZZZ3Q8IYH5 903 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 RELL2Q8NC24 303 aaPredicted RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 NAXEQ8NCW5 288 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 OR6K3Q8NGY3 331 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 USB1Q9BQ65 265 aaKnown RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 COQ10BQ9H8M1 238 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 BCO1Q9HAY6 547 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 PLSCR4Q9NRQ2 329 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 TESQ9UGI8 421 aaKnown RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 DOPEY1Q5JWR5 2465 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 NINQ8N4C6 2090 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 BAHCC1Q9P281 2608 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 A0A0J9YW62 118 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 TMEM229AB2RXF0 380 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 C5orf58C9J3I9 102 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 PRSS44E7EML9 344 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 IGF2P01344 180 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 SLC6A2P23975 617 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 STARP49675 285 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 SLC16A1P53985 500 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 CLDN20P56880 219 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 CSNK2A1P68400 391 aaPredicted RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 MERTKQ12866 999 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 SCARB2Q14108 478 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 NANOGP8Q6NSW7 305 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 LIX1LQ8IVB5 337 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 LILRA2Q8N149 483 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 OR10D3Q8NH80 312 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 STK35Q8TDR2 534 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 FIG4Q92562 907 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 CNOT9Q92600 299 aaKnown RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 AURKBQ96GD4 344 aaPredicted RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 ARHGDIGQ99819 225 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 PCDHAC1Q9H158 963 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 IKZF5Q9H5V7 419 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 NANOGQ9H9S0 305 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 CHRNA9Q9UGM1 479 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 VDAC3Q9Y277 283 aa8.49□□□□□ -1.05
CLK4-209ENST00000521621 RPH3AQ9Y2J0 694 aaPredicted RBP8.49□□□□□ -1.05
CLK4-209ENST00000521621 MFN2O95140 757 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 CDSNQ15517 529 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 TOMM34Q15785 309 aaPredicted RBP8.48□□□□□ -1.05
CLK4-209ENST00000521621 ZNF311Q5JNZ3 666 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 HBMQ6B0K9 141 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 ABLIM2Q6H8Q1 611 aa8.48□□□□□ -1.05
CLK4-209ENST00000521621 DNAJC14Q6Y2X3 702 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms