RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CNEP1R1Q8N9A8 125 aa18.52■□□□□ 0.56
TRIM35-203ENST00000521253 ATP6V1C2Q8NEY4 427 aa18.52■□□□□ 0.56
TRIM35-203ENST00000521253 LRRC46Q96FV0 321 aa18.52■□□□□ 0.56
TRIM35-203ENST00000521253 ACER3Q9NUN7 267 aa18.52■□□□□ 0.56
TRIM35-203ENST00000521253 DNAJB12Q9NXW2 375 aaKnown RBP18.52■□□□□ 0.56
TRIM35-203ENST00000521253 PACSIN3Q9UKS6 424 aa18.52■□□□□ 0.56
TRIM35-203ENST00000521253 MCTS1Q9ULC4 181 aaKnown RBP18.52■□□□□ 0.56
TRIM35-203ENST00000521253 TMEM247A6NEH6 219 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 GJE1A6NN92 205 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 KIR2DL2P43627 348 aaPredicted RBP18.51■□□□□ 0.55
TRIM35-203ENST00000521253 SELENBP1Q13228 472 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 GNA13Q14344 377 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 PDSS1Q5T2R2 415 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 DLEU7Q6UYE1 221 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 LUZP2Q86TE4 346 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 MED12LQ86YW9 2145 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 PEX5LQ8IYB4 626 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 C10orf111Q8N326 155 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 TMEM234Q8WY98 164 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 OSTF1Q92882 214 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 MAL2Q969L2 176 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 STARD4Q96DR4 205 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 C14orf79Q96F83 325 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 PRRG4Q9BZD6 226 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 PIGMQ9H3S5 423 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 A4GALTQ9NPC4 353 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 LEF1Q9UJU2 399 aaPredicted RBP18.51■□□□□ 0.55
TRIM35-203ENST00000521253 FOXD3Q9UJU5 478 aaPredicted RBP18.51■□□□□ 0.55
TRIM35-203ENST00000521253 NDUFAF1Q9Y375 327 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 GMEB1Q9Y692 573 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 CSMD1Q96PZ7 3565 aa18.51■□□□□ 0.55
TRIM35-203ENST00000521253 HEATR5AQ86XA9 2040 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 SYNGR4O95473 234 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 PPIBP23284 216 aaKnown RBP18.5■□□□□ 0.55
TRIM35-203ENST00000521253 SSTR2P30874 369 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 MDH1P40925 334 aaKnown RBP18.5■□□□□ 0.55
TRIM35-203ENST00000521253 ARFIP2P53365 341 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 CARD18P57730 90 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 SIRPAP78324 504 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 MERTKQ12866 999 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 GUSBP1Q15486 140 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 MRPL2Q5T653 305 aaKnown RBP18.5■□□□□ 0.55
TRIM35-203ENST00000521253 VWA1Q6PCB0 445 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 PLEKHM3Q6ZWE6 761 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 RETREG3Q86VR2 466 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 VRK2Q86Y07 508 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 OR52P1PQ8NH57 321 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 ZNF563Q8TA94 476 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 SRXN1Q9BYN0 137 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 IKZF5Q9H5V7 419 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 COQ10BQ9H8M1 238 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 RLIMQ9NVW2 624 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.5■□□□□ 0.55
TRIM35-203ENST00000521253 KCNN3Q9UGI6 736 aa18.5■□□□□ 0.55
TRIM35-203ENST00000521253 A0A0G2JPF8 293 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 HNRNPCL2B2RXH8 293 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 HNRNPCL3B7ZW38 293 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 AP3D1O14617 1153 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 ANGPT2O15123 496 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 HNRNPCL1O60812 293 aaKnown RBP18.49■□□□□ 0.55
TRIM35-203ENST00000521253 HNRNPCL4P0DMR1 293 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 TLE4Q04727 773 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 MYBPHQ13203 477 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 LIN52Q52LA3 116 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 C3orf33Q6P1S2 294 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 ZNF836Q6ZNA1 936 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 BTLAQ7Z6A9 289 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 DPP10Q8N608 796 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 TSPEARQ8WU66 669 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 CCDC106Q9BWC9 280 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 RBM24Q9BX46 236 aaKnown RBP18.49■□□□□ 0.55
TRIM35-203ENST00000521253 SLC24A3Q9HC58 644 aa18.49■□□□□ 0.55
TRIM35-203ENST00000521253 CDHR4A6H8M9 788 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 A8MXE2 369 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 SMNDC1O75940 238 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRIM35-203ENST00000521253 SLC7A1P30825 629 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 CPA2P48052 419 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 IDH2P48735 452 aaKnown RBP18.48■□□□□ 0.55
TRIM35-203ENST00000521253 ZNF239Q16600 458 aaKnown RBP18.48■□□□□ 0.55
TRIM35-203ENST00000521253 GCNT6Q5T4J0 391 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 PRAMEF8Q5VWM4 474 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 PRAMEF7Q5VXH5 474 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 GRINAQ7Z429 371 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 DHDDSQ86SQ9 333 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 ROBO4Q8WZ75 1007 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 CPPED1Q9BRF8 314 aaPredicted RBP18.48■□□□□ 0.55
TRIM35-203ENST00000521253 BCL2L10Q9HD36 194 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 TIGARQ9NQ88 270 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 CTPS2Q9NRF8 586 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 SERINC1Q9NRX5 453 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 GALNT8Q9NY28 637 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 CLEC4AQ9UMR7 237 aa18.48■□□□□ 0.55
TRIM35-203ENST00000521253 ZNF443Q9Y2A4 671 aaPredicted RBP18.48■□□□□ 0.55
TRIM35-203ENST00000521253 A0A1W2PNR3 127 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 CFAP73A6NFT4 308 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 EVPLLA8MZ36 301 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 C5orf58C9J3I9 102 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 MSTNO14793 375 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 PGM3O95394 542 aa18.47■□□□□ 0.55
TRIM35-203ENST00000521253 PLGP00747 810 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms