RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 HSD17B1P14061 328 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 TNNI1P19237 187 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 PPP2R1BP30154 601 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 PITPNBP48739 271 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 SLC12A3P55017 1021 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 KRTAP10-1P60331 282 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 RPS4XP62701 263 aaKnown RBP2.83□□□□□ -1.96
HDAC2-208ENST00000520746 TNNC1P63316 161 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 SLC7A9P82251 487 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 UBXN1Q04323 297 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 ORC2Q13416 577 aaPredicted RBP2.83□□□□□ -1.96
HDAC2-208ENST00000520746 LASP1Q14847 261 aaKnown RBP2.83□□□□□ -1.96
HDAC2-208ENST00000520746 EXOSC7Q15024 291 aaKnown RBP2.83□□□□□ -1.96
HDAC2-208ENST00000520746 PCK2Q16822 640 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 HFEQ30201 348 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 GPAT3Q53EU6 434 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 UNC50Q53HI1 259 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 C10orf120Q5SQS8 335 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 WDR25Q64LD2 544 aaPredicted RBP2.83□□□□□ -1.96
HDAC2-208ENST00000520746 STEAP1BQ6NZ63 245 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 BBS7Q8IWZ6 715 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 DAW1Q8N136 415 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 EID2Q8N6I1 236 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 BEST4Q8NFU0 473 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 FGF11Q92914 225 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 MYLPFQ96A32 169 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 RAB39BQ96DA2 213 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 OTUB2Q96DC9 234 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 ACCSQ96QU6 501 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 ACAT2Q9BWD1 397 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 IL1RL2Q9HB29 575 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 PIGVQ9NUD9 493 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 GPR83Q9NYM4 423 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 RBAKQ9NYW8 714 aaPredicted RBP2.83□□□□□ -1.96
HDAC2-208ENST00000520746 NDUFA13Q9P0J0 144 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 GCNT4Q9P109 453 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 ERVK-18Q9QC07 812 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 SEC14L4Q9UDX3 406 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 CDH9Q9ULB4 789 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 TDRKHQ9Y2W6 561 aaKnown RBP2.83□□□□□ -1.96
HDAC2-208ENST00000520746 MRPS2Q9Y399 296 aaKnown RBP2.83□□□□□ -1.96
HDAC2-208ENST00000520746 PATJQ8NI35 1801 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 ATP8B3O60423 1300 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 NID2Q14112 1375 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 TICRRQ7Z2Z1 1910 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 DMXL2Q8TDJ6 3036 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 DOCK6Q96HP0 2047 aa2.83□□□□□ -1.96
HDAC2-208ENST00000520746 FASNP49327 2511 aaKnown RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 ZFYVE26Q68DK2 2539 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 SPEGQ15772 3267 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 MTCL1Q9Y4B5 1905 aaKnown RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 FER1L5A0AVI2 2057 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 DOCK8Q8NF50 2099 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 ZNF233A6NK53 670 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 FOXI3A8MTJ6 420 aaPredicted RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 TLR4O00206 839 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 CLDN5O00501 218 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 CHEK1O14757 476 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 SH2D1BO14796 132 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 MCF2LO15068 1137 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 LRRTM2O43300 516 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 COCHO43405 550 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 BCL2L11O43521 198 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 HCRTO43612 131 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 VEGFDO43915 354 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 DFNA5O60443 496 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 TSPAN2O60636 221 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 HSF2BPO75031 334 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 FCER2P06734 321 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 CCDC159P0C7I6 412 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 FAM200BP0CF97 657 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 HLA-DPA1P20036 260 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 ADORA2BP29275 332 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 ATP5C1P36542 298 aaKnown RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 PRPHP41219 470 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 ARRB1P49407 418 aaPredicted RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 TPMTP51580 245 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 CNN1P51911 297 aaKnown RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 CLDN6P56747 220 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 HMGN5P82970 282 aaKnown RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 PPP1R8Q12972 351 aaKnown RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 CBX3Q13185 183 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 DNAJC3Q13217 504 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 TSTA3Q13630 321 aaPredicted RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 KLF5Q13887 457 aaPredicted RBP2.82□□□□□ -1.96
HDAC2-208ENST00000520746 CRMP1Q14194 572 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 ABRAXAS2Q15018 415 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 ANKRD55Q3KP44 614 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 CFAP221Q4G0U5 840 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 VWA2Q5GFL6 755 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 PRAMEF7Q5VXH5 474 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 NKAIN2Q5VXU1 208 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 SEL1L3Q68CR1 1132 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 HIST2H2AA3Q6FI13 130 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 ABRAXAS1Q6UWZ7 409 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 KDM7AQ6ZMT4 941 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 ASRGL1Q7L266 308 aa2.82□□□□□ -1.96
HDAC2-208ENST00000520746 PEX5LQ8IYB4 626 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms