RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 PKNOX2Q96KN3 472 aa13.46□□□□□ -0.25
CSMD1-207ENST00000520451 PPP1R36Q96LQ0 422 aa13.46□□□□□ -0.25
CSMD1-207ENST00000520451 PSD2Q9BQI7 771 aa13.46□□□□□ -0.25
CSMD1-207ENST00000520451 THUMPD3Q9BV44 507 aaKnown RBP13.46□□□□□ -0.25
CSMD1-207ENST00000520451 POTEKPQ9BYX7 375 aa13.46□□□□□ -0.25
CSMD1-207ENST00000520451 LAT2Q9GZY6 243 aa13.46□□□□□ -0.25
CSMD1-207ENST00000520451 BCO1Q9HAY6 547 aa13.46□□□□□ -0.25
CSMD1-207ENST00000520451 ASIC5Q9NY37 505 aa13.46□□□□□ -0.25
CSMD1-207ENST00000520451 ING1Q9UK53 422 aaPredicted RBP13.46□□□□□ -0.25
CSMD1-207ENST00000520451 MKLN1Q9UL63 735 aa13.46□□□□□ -0.25
CSMD1-207ENST00000520451 C9JVG2 144 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 SMAD9O15198 467 aaKnown RBP13.45□□□□□ -0.26
CSMD1-207ENST00000520451 TYROBPO43914 113 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 FCMRO60667 390 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 CYTIPO60759 359 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 LYZL6O75951 148 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 SOD3P08294 240 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 UBTFL6P0CB48 400 aaPredicted RBP13.45□□□□□ -0.26
CSMD1-207ENST00000520451 ETV4P43268 484 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 OR3A2P47893 321 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 CASP9P55211 416 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 MERTKQ12866 999 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 TNK1Q13470 666 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 STK11Q15831 433 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 ARHGAP11BQ3KRB8 267 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 Q6ZT83 130 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 EIF3MQ7L2H7 374 aaKnown RBP13.45□□□□□ -0.26
CSMD1-207ENST00000520451 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.45□□□□□ -0.26
CSMD1-207ENST00000520451 ATG4DQ86TL0 474 aaPredicted RBP13.45□□□□□ -0.26
CSMD1-207ENST00000520451 PRIMA1Q86XR5 153 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 NUDCD3Q8IVD9 361 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 ST8SIA1Q92185 356 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 NEUROG1Q92886 237 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 GTPBP3Q969Y2 492 aaKnown RBP13.45□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF775Q96BV0 537 aaPredicted RBP13.45□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF300Q96RE9 604 aaPredicted RBP13.45□□□□□ -0.26
CSMD1-207ENST00000520451 USB1Q9BQ65 265 aaKnown RBP13.45□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF350Q9GZX5 532 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 OR51I1Q9H343 314 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 SERINC1Q9NRX5 453 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 EXD2Q9NVH0 621 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 PRSS50Q9UI38 385 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 KCNE5Q9UJ90 142 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 PCDHGB4Q9UN71 923 aa13.45□□□□□ -0.26
CSMD1-207ENST00000520451 FREM1Q5H8C1 2179 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 RNASET2O00584 256 aaKnown RBP13.44□□□□□ -0.26
CSMD1-207ENST00000520451 ITM2AO43736 263 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 DNAJA2O60884 412 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 UGT2B17O75795 530 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 FESP07332 822 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 PGCP20142 388 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 EDNRAP25101 427 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 SESN3P58005 492 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 BSPH1Q075Z2 132 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 VEZF1Q14119 521 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 CLEC12BQ2HXU8 276 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 SMU1Q2TAY7 513 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF672Q499Z4 452 aaPredicted RBP13.44□□□□□ -0.26
CSMD1-207ENST00000520451 SEZ6L2Q6UXD5 910 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF781Q8N8C0 355 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 KBTBD8Q8NFY9 601 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 PIWIL2Q8TC59 973 aaKnown RBP13.44□□□□□ -0.26
CSMD1-207ENST00000520451 SMAP2Q8WU79 429 aaPredicted RBP13.44□□□□□ -0.26
CSMD1-207ENST00000520451 TMEM234Q8WY98 164 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 TRMT61AQ96FX7 289 aaKnown RBP13.44□□□□□ -0.26
CSMD1-207ENST00000520451 ZIM3Q96PE6 472 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 AKTIPQ9H8T0 292 aa13.44□□□□□ -0.26
CSMD1-207ENST00000520451 MAGED1Q9Y5V3 778 aaPredicted RBP13.44□□□□□ -0.26
CSMD1-207ENST00000520451 A0A1W2PP18 115 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 WDR91A4D1P6 747 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF724A8MTY0 619 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 KIAA1324LA8MWY0 1029 aaPredicted RBP13.43□□□□□ -0.26
CSMD1-207ENST00000520451 OVOL3O00110 214 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 KIAA0513O60268 411 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 SERPINE1P05121 402 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 DANCRP0C864 163 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 OR12D1P0DN82 309 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 CDKN1AP38936 164 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 DIO1P49895 249 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 CSNK2A1P68400 391 aaPredicted RBP13.43□□□□□ -0.26
CSMD1-207ENST00000520451 PPA1Q15181 289 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 CHI3L2Q15782 390 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 MAPK14Q16539 360 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 SYT14P1Q58G82 188 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 ATAD3BQ5T9A4 648 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 HEPHL1Q6MZM0 1159 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 TNFAIP8L2Q6P589 184 aaPredicted RBP13.43□□□□□ -0.26
CSMD1-207ENST00000520451 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 TMPPEQ6ZT21 453 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 GALNT5Q7Z7M9 940 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 ANKRD46Q86W74 232 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF100Q8IYN0 542 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 OR8J2Q8NGG1 315 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 MIPOL1Q8TD10 442 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 AENQ8WTP8 325 aaKnown RBP13.43□□□□□ -0.26
CSMD1-207ENST00000520451 XAGE5Q8WWM1 108 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 ZNF75CPQ92670 426 aaPredicted RBP13.43□□□□□ -0.26
CSMD1-207ENST00000520451 DPY30Q9C005 99 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 ACER3Q9NUN7 267 aa13.43□□□□□ -0.26
CSMD1-207ENST00000520451 WDR45Q9Y484 360 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms