RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ZNF619Q8N2I2 560 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 MRPL43Q8N983 215 aaKnown RBP2.3□□□□□ -2.04
SKP1-207ENST00000520417 OR8H1Q8NGG4 311 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 PINX1Q96BK5 328 aaKnown RBP2.3□□□□□ -2.04
SKP1-207ENST00000520417 SLC25A36Q96CQ1 311 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 C14orf79Q96F83 325 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 CEP170P1Q96L14 293 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 OR2M2Q96R28 347 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 CYP2S1Q96SQ9 504 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 SRXN1Q9BYN0 137 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 PPDPFQ9H3Y8 114 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 SLC25A22Q9H936 323 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 PLGRKTQ9HBL7 147 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 ZDHHC4Q9NPG8 344 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 SOHLH2Q9NX45 425 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 PIN4Q9Y237 131 aaKnown RBP2.3□□□□□ -2.04
SKP1-207ENST00000520417 TP53TG5Q9Y2B4 290 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 ABCC4O15439 1325 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 UBE4BO95155 1302 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 MAP3K15Q6ZN16 1313 aa2.3□□□□□ -2.04
SKP1-207ENST00000520417 SCN2AQ99250 2005 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 GPRASP1Q5JY77 1395 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 FAM230AA0A1W2PPH8 454 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 HELTA6NFD8 242 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 FAM74A7A6NL05 159 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 ANKRD30BLA7E2S9 258 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 E9PMD0 336 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 SGK494L7N484 410 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 ZNF780AO75290 641 aaPredicted RBP2.29□□□□□ -2.04
SKP1-207ENST00000520417 SPAG7O75391 227 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 ANXA3P12429 323 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 RGS1Q08116 209 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 SPP2Q13103 211 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 EXOSC2Q13868 293 aaKnown RBP2.29□□□□□ -2.04
SKP1-207ENST00000520417 CEBPEQ15744 281 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 FAM74A3Q4VXF1 159 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 GPR157Q5UAW9 335 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 ACP7Q6ZNF0 438 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 ARMCX2Q7L311 632 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 PNKDQ8N490 385 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 FAM71CQ8NEG0 241 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 CNIH3Q8TBE1 160 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 GIPC3Q8TF64 312 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 UPRTQ96BW1 309 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 CRNKL1Q9BZJ0 848 aaKnown RBP2.29□□□□□ -2.04
SKP1-207ENST00000520417 SLC25A51Q9H1U9 297 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 ACTR8Q9H981 624 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 GPN2Q9H9Y4 310 aaPredicted RBP2.29□□□□□ -2.04
SKP1-207ENST00000520417 POLD4Q9HCU8 107 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 NGBQ9NPG2 151 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 TREM2Q9NZC2 230 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 ATP6V1HQ9UI12 483 aa2.29□□□□□ -2.04
SKP1-207ENST00000520417 IGHV3-64DA0A0J9YX35 117 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 WASHC1A8K0Z3 465 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 GFYI3L273 518 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 PRPSAP2O60256 369 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 TOM1L1O75674 476 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 TNFSF13O75888 250 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 PTBP3O95758 552 aaKnown RBP2.28□□□□□ -2.04
SKP1-207ENST00000520417 CA3P07451 260 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 ZNF286BP0CG31 522 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 UQCRBP14927 111 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 PAICSP22234 425 aaKnown RBP2.28□□□□□ -2.04
SKP1-207ENST00000520417 CAMLGP49069 296 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 CSTF1Q05048 431 aaKnown RBP2.28□□□□□ -2.04
SKP1-207ENST00000520417 FUT7Q11130 342 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 PARP10Q53GL7 1025 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 ISLR2Q6UXK2 745 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 MISPQ8IVT2 679 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 ZNF695Q8IW36 515 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 EFCAB13Q8IY85 973 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 MINDY2Q8NBR6 621 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 STKLD1Q8NE28 680 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 ANKRD20A12PQ8NF67 263 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 AENQ8WTP8 325 aaKnown RBP2.28□□□□□ -2.04
SKP1-207ENST00000520417 SLC5A11Q8WWX8 675 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 STARD8Q92502 1023 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 KCNK16Q96T55 309 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 RWDD1Q9H446 243 aaPredicted RBP2.28□□□□□ -2.04
SKP1-207ENST00000520417 VAT1LQ9HCJ6 419 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 MGAT4BQ9UQ53 548 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 CLCA3PQ9Y6N3 262 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 HIVEP2P31629 2446 aa2.28□□□□□ -2.04
SKP1-207ENST00000520417 OR6C65A6NJZ3 312 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 LRRC30A6NM36 301 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 WASH3PC4AMC7 463 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 AIREO43918 545 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 FAM189A1O60320 539 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 TSPY4P0CV99 314 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 TSPY10P0CW01 314 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 HOXA9P31269 272 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 NAPAP54920 295 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 IL1RL1Q01638 556 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 KPRPQ5T749 579 aaPredicted RBP2.27□□□□□ -2.05
SKP1-207ENST00000520417 LIPNQ5VXI9 398 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 WASH2PQ6VEQ5 465 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 LANCL3Q6ZV70 420 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 BCORP1Q8N888 145 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 CNNM3Q8NE01 707 aa2.27□□□□□ -2.05
SKP1-207ENST00000520417 SELENOMQ8WWX9 145 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms