RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 SERTAD2Q14140 314 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 MAPK6Q16659 721 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 ZNF311Q5JNZ3 666 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 MCOLN2Q8IZK6 566 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 CEND1Q8N111 149 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 FADS6Q8N9I5 356 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 OR2T34Q8NGX1 318 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 THUMPD2Q9BTF0 503 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 PALMDQ9NP74 551 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 POLE3Q9NRF9 147 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 SLC35D1Q9NTN3 355 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 ISY1Q9ULR0 285 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 SMC3Q9UQE7 1217 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 GMPPBQ9Y5P6 360 aa3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 PRRC2AP48634 2157 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-222ENST00000520400 BRD4O60885 1362 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 TOGARAM1Q9Y4F4 1720 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 CLDN3O15551 220 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 JAK2O60674 1132 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 UFL1O94874 794 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 KRT6BP04259 564 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 CPN1P15169 458 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 HPDP32754 393 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 ACAA2P42765 397 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 KRT6CP48668 564 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 RPL34P49207 117 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 ACADVLP49748 655 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 EWSR1Q01844 656 aaKnown RBP eCLIP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 ELP6Q0PNE2 266 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 OVGP1Q12889 678 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 PRR30Q53SZ7 412 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 TMEM41BQ5BJD5 291 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 C9orf129Q5T035 196 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 ZNF544Q6NX49 715 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 CXCL17Q6UXB2 119 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 C2orf66Q6UXQ4 117 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 ANKRD37Q7Z713 158 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 SERPINA9Q86WD7 417 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 ZNF584Q8IVC4 421 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 OR13F1Q8NGS4 319 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 CCDC110Q8TBZ0 833 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 RSPH1Q8WYR4 309 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 RPL3LQ92901 407 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 PSMG2Q969U7 264 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 TMEM80Q96HE8 168 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 C16orf45Q96MC5 204 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 ZNF416Q9BWM5 594 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 ELOVL4Q9GZR5 314 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 WDR76Q9H967 626 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 PLSCR3Q9NRY6 295 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 ZNF275Q9NSD4 429 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 PAK1IP1Q9NWT1 392 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 RNF6Q9Y252 685 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 EIF3LQ9Y262 564 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 CA5BQ9Y2D0 317 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 TAF1LQ8IZX4 1826 aa3.28□□□□□ -1.88
CTNNA1-222ENST00000520400 SMG6Q86US8 1419 aaKnown RBP3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 COL24A1Q17RW2 1714 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 PKD1L3Q7Z443 1732 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 CPDO75976 1380 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 FLT4P35916 1363 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 GUCA1CO95843 209 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 HEXBP07686 556 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 CALCBP10092 127 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 ADSSP30520 456 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 CA8P35219 290 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 IGLV3-21P80748 117 aaPredicted RBP3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 KCNJ11Q14654 390 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 NCR3LG1Q68D85 454 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 PYHIN1Q6K0P9 492 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 AFTPHQ6ULP2 937 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 DPY19L4Q7Z388 723 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 ERICH1Q86X53 443 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 C11orf53Q8IXP5 236 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 UBQLNLQ8IYU4 475 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 GPD1LQ8N335 351 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 DEFB123Q8N688 67 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 ZNF525Q8N782 197 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 TFB1MQ8WVM0 346 aaKnown RBP3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 SLC25A38Q96DW6 304 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 OR5M11Q96RB7 305 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 GSDMCQ9BYG8 508 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 PRO3102Q9H379 93 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 VNN3Q9NY84 501 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 SENP1Q9P0U3 644 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 CGNQ9P2M7 1197 aaKnown RBP3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 CYTH4Q9UIA0 394 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 RIMS3Q9UJD0 308 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 TUBGCP6Q96RT7 1819 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 BDP1A6H8Y1 2624 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 LTBP1Q14766 1721 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 ZFHX4Q86UP3 3567 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 CASP8AP2Q9UKL3 1982 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 OVOS2A0A0G2JMS6 1433 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 CRB1P82279 1406 aa3.27□□□□□ -1.89
CTNNA1-222ENST00000520400 NSD2O96028 1365 aa3.26□□□□□ -1.89
CTNNA1-222ENST00000520400 FRMPD3Q5JV73 1810 aa3.26□□□□□ -1.89
CTNNA1-222ENST00000520400 SF3B1O75533 1304 aaKnown RBP eCLIP3.26□□□□□ -1.89
CTNNA1-222ENST00000520400 SIPA1L3O60292 1781 aaPredicted RBP3.26□□□□□ -1.89
CTNNA1-222ENST00000520400 ABCC6O95255 1503 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms