RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 A0A0G2JMP0 313 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 A0A0G2JND7 137 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 A0A0X1KG70 313 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 A0A1W2PPR1 153 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCDC160A6NGH7 325 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 A8MU76 341 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 C19orf81C9J6K1 198 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 J3QRK9 145 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 hCG_2039718K7EN88 272 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 KPNA4O00629 521 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCSO14618 274 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC9A3R1O14745 358 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 POLR1CO15160 346 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC16A4O15374 487 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 P2RX6O15547 441 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SPOPO43791 374 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CRLF1O75462 422 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CIB2O75838 187 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 BCAS2O75934 225 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CLPXO76031 633 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 MYO1DO94832 1006 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CDK14O94921 469 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 LSM8O95777 96 aaKnown RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ANGPTL1O95841 491 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCNE2O96020 404 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 IGHV3-13P01766 116 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ALOX5P09917 674 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ATP6V1B1P15313 513 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ACKR3P25106 362 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SHC1P29353 583 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 OXTRP30559 389 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ARL2P36404 184 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 HPCAL1P37235 193 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 KRT6CP48668 564 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 HCAR3P49019 387 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 PGFP49763 221 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CCR4P51679 360 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMBIM6P55061 237 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 GNG2P59768 71 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ABCE1P61221 599 aaKnown RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 BTG1P62324 171 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 GBE1Q04446 702 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 OVGP1Q12889 678 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SPP2Q13103 211 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ENPP2Q13822 863 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 TFDP1Q14186 410 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 NFE2L1Q14494 772 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 MESDQ14696 234 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 RFTN1Q14699 578 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 MORF4L2Q15014 288 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 TRIP10Q15642 601 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 MLF2Q15773 248 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 C3AR1Q16581 482 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 YIF1BQ5BJH7 314 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 Q5BKY6 102 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 PIGGQ5H8A4 983 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 GLRA4Q5JXX5 417 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 C6orf52Q5T4I8 152 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ATAD3BQ5T9A4 648 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 C1orf146Q5VVC0 180 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 XAF1Q6GPH4 301 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 PMF1Q6P1K2 205 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ZFP1Q6P2D0 407 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLC39A4Q6P5W5 647 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 IYDQ6PHW0 289 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CYP4V2Q6ZWL3 525 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 FRA10AC1Q70Z53 315 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CYS1Q717R9 158 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SETD3Q86TU7 594 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 RALGPS2Q86X27 583 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CBWD2Q8IUF1 395 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CLVS1Q8IUQ0 354 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 LYG1Q8N1E2 194 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 Q8N377 158 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 FBXW8Q8N3Y1 598 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 Q8N9G6 341 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ICA1LQ8NDH6 482 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CATSPER1Q8NEC5 780 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 C17orf47Q8NEP4 570 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 OR13F1Q8NGS4 319 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 OR10Z1Q8NGY1 313 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 OR6F1Q8NGZ6 308 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 RAB3IL1Q8TBN0 382 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SUN5Q8TC36 379 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 GANCQ8TET4 914 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 RASSF5Q8WWW0 418 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SMPDL3AQ92484 453 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 RFT1Q96AA3 541 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SLCO4A1Q96BD0 722 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ULK4Q96C45 1275 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 SH3YL1Q96HL8 342 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CNDP1Q96KN2 507 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 C12orf42Q96LP6 360 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 ALKBH3Q96Q83 286 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 PSKH2Q96QS6 385 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 TAAR1Q96RJ0 339 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CYTH2Q99418 400 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 PYGO2Q9BRQ0 406 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 CHCHD5Q9BSY4 110 aa2.68□□□□□ -1.98
HMGB1P41-201ENST00000520234 TSSK1BQ9BXA7 367 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms