RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 CPNE4Q96A23 557 aaPredicted RBP16.56■□□□□ 0.24
SREK1-207ENST00000520058 TMEM185BQ9H7F4 350 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 BCL2L10Q9HD36 194 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 GLRX2Q9NS18 164 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 SLAMF8Q9P0V8 285 aa16.56■□□□□ 0.24
SREK1-207ENST00000520058 DSPPQ9NZW4 1301 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 CENPVL1A0A0U1RR11 272 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 CFAP73A6NFT4 308 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 KDM4EB2RXH2 506 aaPredicted RBP16.55■□□□□ 0.24
SREK1-207ENST00000520058 TNFSF11O14788 317 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 SLC22A2O15244 555 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 CCDC22O60826 627 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 NPPAP01160 153 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 ETS2P15036 469 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 HOXB9P17482 250 aaPredicted RBP16.55■□□□□ 0.24
SREK1-207ENST00000520058 UQCRC1P31930 480 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 CPA2P48052 419 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 SESN3P58005 492 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 CDK6Q00534 326 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 SF3A3Q12874 501 aaKnown RBP eCLIP16.55■□□□□ 0.24
SREK1-207ENST00000520058 TOMM34Q15785 309 aaPredicted RBP16.55■□□□□ 0.24
SREK1-207ENST00000520058 TMEM176BQ3YBM2 270 aaPredicted RBP16.55■□□□□ 0.24
SREK1-207ENST00000520058 COQ5Q5HYK3 327 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 MRPL2Q5T653 305 aaKnown RBP16.55■□□□□ 0.24
SREK1-207ENST00000520058 ZNF550Q7Z398 422 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 GRINAQ7Z429 371 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 HMGN2P46Q86SG4 172 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 KIF18BQ86Y91 864 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 LIX1LQ8IVB5 337 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 GCNT2Q8N0V5 402 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 CNEP1R1Q8N9A8 125 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 ATP6V1C2Q8NEY4 427 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 BHLHE22Q8NFJ8 381 aaPredicted RBP16.55■□□□□ 0.24
SREK1-207ENST00000520058 FNDC9Q8TBE3 224 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 OSTF1Q92882 214 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 ANKRD27Q96NW4 1050 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 ZNF317Q96PQ6 595 aaPredicted RBP16.55■□□□□ 0.24
SREK1-207ENST00000520058 ZNF607Q96SK3 696 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 CGREF1Q99674 301 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 ENKD1Q9H0I2 346 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 ANGPT4Q9Y264 503 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 CAPN7Q9Y6W3 813 aa16.55■□□□□ 0.24
SREK1-207ENST00000520058 TRBV5-3A0A0A0MS03 114 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 CDHR4A6H8M9 788 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 H0YC42 278 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 C19orf84I3L1E1 186 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 ETV2O00321 342 aaPredicted RBP16.54■□□□□ 0.24
SREK1-207ENST00000520058 SYT5O00445 386 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 SERPINB7O75635 380 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 TGM6O95932 706 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 OPN1LWP04000 364 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 ARAFP10398 606 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 IDH2P48735 452 aaKnown RBP16.54■□□□□ 0.24
SREK1-207ENST00000520058 MAP2K6P52564 334 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 TPD52P55327 224 aaPredicted RBP16.54■□□□□ 0.24
SREK1-207ENST00000520058 CTBP2P56545 445 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 KLF10Q13118 480 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 CYP51A1Q16850 503 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 RUNDC3AQ59EK9 446 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 ZNF311Q5JNZ3 666 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 RNF220Q5VTB9 566 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 CGB2Q6NT52 195 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 DLEU7Q6UYE1 221 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 GDF7Q7Z4P5 450 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 MSRB3Q8IXL7 192 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 CNOT9Q92600 299 aaKnown RBP16.54■□□□□ 0.24
SREK1-207ENST00000520058 RNASE6Q93091 150 aaKnown RBP16.54■□□□□ 0.24
SREK1-207ENST00000520058 ZNF845Q96IR2 970 aaPredicted RBP16.54■□□□□ 0.24
SREK1-207ENST00000520058 TMEM38AQ9H6F2 299 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 RNF122Q9H9V4 155 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 FANCFQ9NPI8 374 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 SAR1AQ9NR31 198 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 GID8Q9NWU2 228 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 DNAJB12Q9NXW2 375 aaKnown RBP16.54■□□□□ 0.24
SREK1-207ENST00000520058 SLC13A4Q9UKG4 626 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 PACSIN3Q9UKS6 424 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 ZNF443Q9Y2A4 671 aaPredicted RBP16.54■□□□□ 0.24
SREK1-207ENST00000520058 EMC9Q9Y3B6 208 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 MPDZO75970 2070 aa16.54■□□□□ 0.24
SREK1-207ENST00000520058 A0A0J9YW62 118 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 PRORSD1PA6NEY8 169 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 FAAHO00519 579 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 CXCL13O43927 109 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 PGM3O95394 542 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 NTN1O95631 604 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 NUDT7P0C024 238 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 AGFG1P52594 562 aaKnown RBP16.53■□□□□ 0.24
SREK1-207ENST00000520058 CSNK2A1P68400 391 aaPredicted RBP16.53■□□□□ 0.24
SREK1-207ENST00000520058 TFF3Q07654 80 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 SCARB2Q14108 478 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 TRMT5Q32P41 509 aaKnown RBP16.53■□□□□ 0.24
SREK1-207ENST00000520058 FBXL19-AS1Q494R0 122 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 POMZP3Q6PJE2 187 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 ZNF836Q6ZNA1 936 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 PLEKHM3Q6ZWE6 761 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 CPLX4Q7Z7G2 160 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 SLC30A8Q8IWU4 369 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 RELL2Q8NC24 303 aaPredicted RBP16.53■□□□□ 0.24
SREK1-207ENST00000520058 C11orf65Q8NCR3 313 aa16.53■□□□□ 0.24
SREK1-207ENST00000520058 NFKBIDQ8NI38 313 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms