RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SLC35G5Q96KT7 338 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 DACH2Q96NX9 599 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 OR52B2Q96RD2 323 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 THUMPD3Q9BV44 507 aaKnown RBP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF350Q9GZX5 532 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 OPN3Q9H1Y3 402 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-215ENST00000519474 EXD2Q9NVH0 621 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 CLEC4AQ9UMR7 237 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 PRELID1Q9Y255 219 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 HEATR5AQ86XA9 2040 aa8.37□□□□□ -1.07
HDAC3-215ENST00000519474 ETV2O00321 342 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-215ENST00000519474 BCAS1O75363 584 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-215ENST00000519474 SLC22A3O75751 556 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 NUDT14O95848 222 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 AK1P00568 194 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 GSNP06396 782 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 CD8BP10966 210 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 PGM1P36871 562 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 CD79BP40259 229 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 EIF1P41567 113 aaKnown RBP8.36□□□□□ -1.07
HDAC3-215ENST00000519474 SUMO3P55854 103 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-215ENST00000519474 CHRNEQ04844 493 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 FOXF1Q12946 379 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 SYPL1Q16563 259 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 COX20Q5RI15 118 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 HBMQ6B0K9 141 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 EPGNQ6UW88 154 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 FRRS1Q6ZNA5 592 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 FAM214BQ7L5A3 538 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF614Q8N883 585 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 RFWD2Q8NHY2 731 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 ROPN1LQ96C74 230 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 MRGPRX4Q96LA9 322 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 KLHL15Q96M94 604 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 SLC35A5Q9BS91 424 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 PRRG4Q9BZD6 226 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 CLEC4MQ9H2X3 399 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-215ENST00000519474 TMEM185BQ9H7F4 350 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 PLEKHF2Q9H8W4 249 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 MTHFD2LQ9H903 347 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-215ENST00000519474 TMEM165Q9HC07 324 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 POLE3Q9NRF9 147 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 SLC6A13Q9NSD5 602 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 PAQR5Q9NXK6 330 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-215ENST00000519474 ELOVL5Q9NYP7 299 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 NDRG3Q9UGV2 375 aa8.36□□□□□ -1.07
HDAC3-215ENST00000519474 GPC6Q9Y625 555 aaPredicted RBP8.36□□□□□ -1.07
HDAC3-215ENST00000519474 APCP25054 2843 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 TEX15Q9BXT5 2789 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 A0A1W2PPR1 153 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SH3D21A4FU49 640 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 CLDN24A6NM45 220 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 CASKO14936 926 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 UBDO15205 165 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 ATP8B1O43520 1251 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 CYP7B1O75881 506 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SYNGR4O95473 234 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 AGR2O95994 175 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 CSTAP01040 98 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 HRGP04196 525 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 IL6P05231 212 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 UBL4AP11441 157 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SFTPDP35247 375 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 CHI3L1P36222 383 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-215ENST00000519474 CPA2P48052 419 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 MVDP53602 400 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 BPIFB3P59826 476 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 KCNJ10P78508 379 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 PLAURQ03405 335 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SKP2Q13309 424 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 FGFBP1Q14512 234 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 QPRTQ15274 297 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 MAPK11Q15759 364 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 GSTA3Q16772 222 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 PDCD4Q53EL6 469 aaKnown RBP8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SMUG1Q53HV7 270 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 TTMPQ5BVD1 217 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 PDSS1Q5T2R2 415 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 ATAD3BQ5T9A4 648 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 ANKRD34AQ69YU3 496 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 GTF2IRD2BQ6EKJ0 949 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SPNS3Q6ZMD2 512 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 C16orf62Q7Z3J2 963 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 GTF2IRD2Q86UP8 949 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 RNF130Q86XS8 419 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 ZNF619Q8N2I2 560 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 ANKFN1Q8N957 763 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 GLB1L3Q8NCI6 653 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-215ENST00000519474 ATP6V1C2Q8NEY4 427 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 TOR1AIP2Q8NFQ8 470 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 ZFP90Q8TF47 636 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 GMPPAQ96IJ6 420 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-215ENST00000519474 MARK4Q96L34 752 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 ATP6V1G3Q96LB4 118 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 PANX1Q96RD7 426 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SRXN1Q9BYN0 137 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 QRSL1Q9H0R6 528 aaKnown RBP8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SLC38A1Q9H2H9 487 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SLCO1B3Q9NPD5 702 aa8.35□□□□□ -1.07
HDAC3-215ENST00000519474 SDR39U1Q9NRG7 319 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms