RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 PPP1R36Q96LQ0 422 aa14.04□□□□□ -0.16
MRPS28-204ENST00000519120 CCDC115Q96NT0 180 aa14.04□□□□□ -0.16
MRPS28-204ENST00000519120 NUF2Q9BZD4 464 aa14.04□□□□□ -0.16
MRPS28-204ENST00000519120 C12orf49Q9H741 205 aa14.04□□□□□ -0.16
MRPS28-204ENST00000519120 SERINC1Q9NRX5 453 aa14.04□□□□□ -0.16
MRPS28-204ENST00000519120 ACER3Q9NUN7 267 aa14.04□□□□□ -0.16
MRPS28-204ENST00000519120 BTNL2Q9UIR0 455 aa14.04□□□□□ -0.16
MRPS28-204ENST00000519120 MKLN1Q9UL63 735 aa14.04□□□□□ -0.16
MRPS28-204ENST00000519120 WDR45Q9Y484 360 aa14.04□□□□□ -0.16
MRPS28-204ENST00000519120 NIPBLQ6KC79 2804 aaeCLIP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 CYTIPO60759 359 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 BGNP21810 368 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 FKBP2P26885 142 aaKnown RBP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 PGM1P36871 562 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 KHKP50053 298 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 RNF144AP50876 292 aaPredicted RBP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 SESN3P58005 492 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 BST1Q10588 318 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 TIGD2Q4W5G0 525 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 SPANXN4Q5MJ08 99 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 CEP85LQ5SZL2 805 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 SFRP5Q5T4F7 317 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 TYW3Q6IPR3 259 aaKnown RBP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 ADAM5Q6NVV9 412 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 ZNF704Q6ZNC4 412 aaPredicted RBP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 SSX8Q7RTT4 187 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 NUFIP2Q7Z417 695 aaKnown RBP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 CLEC4FQ8N1N0 589 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 ZNF611Q8N823 705 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 RFWD2Q8NHY2 731 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 ROPN1LQ96C74 230 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 PSD2Q9BQI7 771 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 THUMPD3Q9BV44 507 aaKnown RBP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 GSX1Q9H4S2 264 aaPredicted RBP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 NGBQ9NPG2 151 aa14.03□□□□□ -0.16
MRPS28-204ENST00000519120 EXOSC3Q9NQT5 275 aaKnown RBP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 ING1Q9UK53 422 aaPredicted RBP14.03□□□□□ -0.16
MRPS28-204ENST00000519120 CENPVL1A0A0U1RR11 272 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 ZNF724A8MTY0 619 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 SMAD9O15198 467 aaKnown RBP14.02□□□□□ -0.17
MRPS28-204ENST00000519120 H6PDO95479 791 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 CNOT4O95628 575 aaKnown RBP14.02□□□□□ -0.17
MRPS28-204ENST00000519120 UBTFL6P0CB48 400 aaPredicted RBP14.02□□□□□ -0.17
MRPS28-204ENST00000519120 OR12D1P0DN82 309 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 ENPP1P22413 925 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 ADSLP30566 484 aaPredicted RBP14.02□□□□□ -0.17
MRPS28-204ENST00000519120 S100A3P33764 101 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 APOBEC1P41238 236 aaKnown RBP14.02□□□□□ -0.17
MRPS28-204ENST00000519120 OR3A2P47893 321 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 CSNK2A1P68400 391 aaPredicted RBP14.02□□□□□ -0.17
MRPS28-204ENST00000519120 FUT5Q11128 374 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 MAPK14Q16539 360 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 FAM174BQ3ZCQ3 159 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 FRRS1Q6ZNA5 592 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 Q6ZT83 130 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 SPATA19Q7Z5L4 167 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 ANKRD46Q86W74 232 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 ZNF619Q8N2I2 560 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 TRIML2Q8N7C3 387 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 ATP6V1C2Q8NEY4 427 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 XAGE5Q8WWM1 108 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 HSD17B8Q92506 261 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 S100PBPQ96BU1 408 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 PLPPR2Q96GM1 343 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 COX4I2Q96KJ9 171 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 CENPHQ9H3R5 247 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 KCNK9Q9NPC2 374 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 ZNF701Q9NV72 531 aaPredicted RBP14.02□□□□□ -0.17
MRPS28-204ENST00000519120 AIG1Q9NVV5 245 aa14.02□□□□□ -0.17
MRPS28-204ENST00000519120 MARCOQ9UEW3 520 aaPredicted RBP14.02□□□□□ -0.17
MRPS28-204ENST00000519120 SPIN1Q9Y657 262 aaPredicted RBP14.02□□□□□ -0.17
MRPS28-204ENST00000519120 A0A1W2PNR3 127 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 HS3ST1O14792 307 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 DNPH1O43598 174 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 CYP7B1O75881 506 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 CPSF4O95639 269 aaKnown RBP14.01□□□□□ -0.17
MRPS28-204ENST00000519120 IL32P24001 234 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 CHI3L1P36222 383 aaPredicted RBP14.01□□□□□ -0.17
MRPS28-204ENST00000519120 MAGEA8P43361 318 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 CLK1P49759 484 aaKnown RBP14.01□□□□□ -0.17
MRPS28-204ENST00000519120 ANXA11P50995 505 aaKnown RBP14.01□□□□□ -0.17
MRPS28-204ENST00000519120 SLC18A1P54219 525 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 MERTKQ12866 999 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 ITGADQ13349 1161 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 PDK3Q15120 406 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 SYT14P1Q58G82 188 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 TNFAIP8L2Q6P589 184 aaPredicted RBP14.01□□□□□ -0.17
MRPS28-204ENST00000519120 TMPPEQ6ZT21 453 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 WFDC8Q8IUA0 241 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 CMIPQ8IY22 773 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 TMEM171Q8WVE6 324 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 PMM1Q92871 262 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 KISS1RQ969F8 398 aaPredicted RBP14.01□□□□□ -0.17
MRPS28-204ENST00000519120 OR5B2Q96R09 309 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 SLC35A5Q9BS91 424 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 BDH2Q9BUT1 245 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 POTEKPQ9BYX7 375 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 QRSL1Q9H0R6 528 aaKnown RBP14.01□□□□□ -0.17
MRPS28-204ENST00000519120 CXorf56Q9H5V9 222 aa14.01□□□□□ -0.17
MRPS28-204ENST00000519120 PNPOQ9NVS9 261 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms