RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	LINC01560	Q8TB33	94 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	PNPT1	Q8TCS8	783 aa	Known RBP	21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	MAGEB18	Q96M61	343 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	GPATCH1	Q9BRR8	931 aa	Known RBP	21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	OPN3	Q9H1Y3	402 aa	Predicted RBP	21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	GP6	Q9HCN6	339 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	ACER3	Q9NUN7	267 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	OTOG	Q6ZRI0	2925 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	ANKRD17	O75179	2603 aa	Known RBP	21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	DBI	P07108	87 aa	Known RBP	21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	IL7R	P16871	459 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	IL11	P20809	199 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	PGM1	P36871	562 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	APOBEC1	P41238	236 aa	Known RBP	21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	IDH3A	P50213	366 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	FUT5	Q11128	374 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	MAPK14	Q16539	360 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	SYPL1	Q16563	259 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	ZNF239	Q16600	458 aa	Known RBP	21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	FAM71C	Q8NEG0	241 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	ATP6V1C2	Q8NEY4	427 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	RABEP2	Q9H5N1	569 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	TPT1P8	Q9HAU6	139 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	PLSCR4	Q9NRQ2	329 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	ZNF226	Q9NYT6	803 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	ITGB1BP2	Q9UKP3	347 aa		21.65	■■□□□ 1.06
CNOT7-204	ENST00000518885	FAM221A	A4D161	298 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	AGAP5	A6NIR3	686 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	C16orf97	H3BN30	126 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	CGA	P01215	116 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	HTR3A	P46098	478 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	CRISP3	P54108	245 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	SESN3	P58005	492 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	MERTK	Q12866	999 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	ZSWIM7	Q19AV6	140 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	TMEM201	Q5SNT2	666 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	ANKFN1	Q8N957	763 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	RNF128	Q8TEB7	428 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	WDR60	Q8WVS4	1066 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	NINJ1	Q92982	152 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	KLHDC3	Q9BQ90	382 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	SIKE1	Q9BRV8	207 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	SLC38A1	Q9H2H9	487 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	ARMC7	Q9H6L4	198 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	MED12L	Q86YW9	2145 aa		21.64	■■□□□ 1.05
CNOT7-204	ENST00000518885	CENPVL1	A0A0U1RR11	272 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	PRKD3	O94806	890 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	RAC3	P60763	192 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	DSTN	P60981	165 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	CSNK2A1	P68400	391 aa	Predicted RBP	21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	BEND4	Q6ZU67	534 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	OLIG3	Q7RTU3	272 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	GRINA	Q7Z429	371 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	ZNF440	Q8IYI8	595 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	ZNF610	Q8N9Z0	462 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	OR9I1	Q8NGQ6	314 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	CKAP2	Q8WWK9	683 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	STON2	Q8WXE9	905 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	VPS33A	Q96AX1	596 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	MED18	Q9BUE0	208 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	TRIM33	Q9UPN9	1127 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	PCNX3	Q9H6A9	2034 aa		21.63	■■□□□ 1.05
CNOT7-204	ENST00000518885	CHRM4	P08173	479 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	PPIB	P23284	216 aa	Known RBP	21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	UGT2B10	P36537	528 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	ATP4B	P51164	291 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	FAM27E3	Q08E93	113 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	COX20	Q5RI15	118 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	ZNF474	Q6S9Z5	364 aa	Predicted RBP	21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	PLEKHM3	Q6ZWE6	761 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	FCRLA	Q7L513	359 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	OR5B2	Q96R09	309 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	KLHL9	Q9P2J3	617 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	CLEC4A	Q9UMR7	237 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	TESMIN	Q9Y4I5	508 aa		21.62	■■□□□ 1.05
CNOT7-204	ENST00000518885	POLQ	O75417	2590 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	PRAMEF27	A3QJZ7	478 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	EFNA2	O43921	213 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	NID1	P14543	1247 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	PPP3CB	P16298	524 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	RYK	P34925	604 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	CLK1	P49759	484 aa	Known RBP	21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	MAP2K6	P52564	334 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	FADD	Q13158	208 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	SQLE	Q14534	574 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	LIN52	Q52LA3	116 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	CDC20B	Q86Y33	519 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	GTF2H4	Q92759	462 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	ZHX1-C8orf76	Q96EF9	292 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	KLHL13	Q9P2N7	655 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885	ZNF232	Q9UNY5	417 aa		21.61	■■□□□ 1.05
CNOT7-204	ENST00000518885		A0A096LPI6	279 aa		21.6	■■□□□ 1.05
CNOT7-204	ENST00000518885	ETFA	P13804	333 aa		21.6	■■□□□ 1.05
CNOT7-204	ENST00000518885	ENPP1	P22413	925 aa		21.6	■■□□□ 1.05
CNOT7-204	ENST00000518885	SHC1	P29353	583 aa		21.6	■■□□□ 1.05
CNOT7-204	ENST00000518885	AGTR1	P30556	359 aa		21.6	■■□□□ 1.05
CNOT7-204	ENST00000518885	DNAJA1	P31689	397 aa	Known RBP	21.6	■■□□□ 1.05
CNOT7-204	ENST00000518885	LARS2	Q15031	903 aa	Known RBP	21.6	■■□□□ 1.05
CNOT7-204	ENST00000518885	EXOC3L2	Q2M3D2	409 aa		21.6	■■□□□ 1.05
CNOT7-204	ENST00000518885	SYT14P1	Q58G82	188 aa		21.6	■■□□□ 1.05

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms