RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CLMPQ9H6B4 373 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 POLD4Q9HCU8 107 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 RBM28Q9NW13 759 aaKnown RBP-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 GPATCH2LQ9NWQ4 482 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 PAK1IP1Q9NWT1 392 aaPredicted RBP-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 TREM2Q9NZC2 230 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 MBD2Q9UBB5 411 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 PCYOX1Q9UHG3 505 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 TEKT2Q9UIF3 430 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 MCTS1Q9ULC4 181 aaKnown RBP-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 PLLPQ9Y342 182 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 COMMD10Q9Y6G5 202 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 IGSF10Q6WRI0 2623 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 PRR14LQ5THK1 2151 aa-0.83□□□□□ -2.54
SCARNA23-201ENST00000516060 AHDC1Q5TGY3 1603 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 IGHV3OR16-13A0A075B7E8 117 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 A0A087X0K7 114 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 RHOBTB1O94844 696 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 GLSO94925 669 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 OLFM2O95897 454 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 JCHAINP01591 159 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 IGHDP01880 384 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 FYNP06241 537 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 DCKP27707 260 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 HOXD13P35453 343 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 TNFSF10P50591 281 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 STK4Q13043 487 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 CDO1Q16878 200 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 CDC42EP5Q6NZY7 148 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 HACD2Q6Y1H2 254 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 PPP1R21Q6ZMI0 780 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 CHCHD4Q8N4Q1 142 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 POMGNT2Q8NAT1 580 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 OR6C4Q8NGE1 309 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 RNASE11Q8TAA1 199 aaKnown RBP-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 FANK1Q8TC84 345 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 C17orf50Q8WW18 174 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 ZBED3Q96IU2 234 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 FCRL1Q96LA6 429 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 ACCSQ96QU6 501 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 CHAC1Q9BUX1 264 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 ZDHHC6Q9H6R6 413 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 HMG20AQ9NP66 347 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 FBXO6Q9NRD1 293 aaPredicted RBP-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 STARD5Q9NSY2 213 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 ZCCHC3Q9NUD5 404 aaKnown RBP-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 DCAF13Q9NV06 445 aaKnown RBP-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 CNOT2Q9NZN8 540 aaKnown RBP-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 BCCIPQ9P287 314 aaKnown RBP eCLIP-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 APPL1Q9UKG1 709 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 OR51B4Q9Y5P0 310 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 SLC25A15Q9Y619 301 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 MYO9BQ13459 2157 aa-0.84□□□□□ -2.54
SCARNA23-201ENST00000516060 ZBED9Q6R2W3 1325 aa-0.85□□□□□ -2.54
SCARNA23-201ENST00000516060 hCG_1807616A0A1W2PRN6 198 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 ARHGEF35A5YM69 484 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 A8MUI8 341 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 FAM86B1E9PN63 330 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 IFRD1O00458 451 aaPredicted RBP-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 TM9SF1O15321 606 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 ZNF73O43830 326 aaPredicted RBP-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 CD74P04233 296 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 FAM86B2P0C5J1 330 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 ZNF35P13682 527 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 B4GALT1P15291 398 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 EPHX2P34913 555 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 SLC10A7Q0GE19 358 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 FUT5Q11128 374 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 NPRL3Q12980 569 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 NFE2L1Q14494 772 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 KARSQ15046 597 aaKnown RBP-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 BOLA3Q53S33 107 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 STUMQ69YW2 141 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 PVRIGQ6DKI7 326 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 RAET1GQ6H3X3 334 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 MZT2BQ6NZ67 158 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 RANBP3LQ86VV4 465 aaPredicted RBP-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 IFNEQ86WN2 208 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 NRMQ8IXM6 262 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 CCDC54Q8NEL0 328 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 LINC01560Q8TB33 94 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 CD300LFQ8TDQ1 290 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 TRUB1Q8WWH5 349 aaKnown RBP-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 SLC5A11Q8WWX8 675 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 MRPL53Q96EL3 112 aaKnown RBP-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 PGLYRP4Q96LB8 373 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 PPM1MQ96MI6 270 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 DDX50Q9BQ39 737 aaKnown RBP-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 INPP5KQ9BT40 448 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 ROGDIQ9GZN7 287 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 RACGAP1Q9H0H5 632 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 SLC25A51Q9H1U9 297 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 PGAP2Q9UHJ9 254 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 PLA2G4CQ9UP65 541 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 R4GN34 69 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 SDK1Q7Z5N4 2213 aa-0.85□□□□□ -2.55
SCARNA23-201ENST00000516060 LRP1Q07954 4544 aaKnown RBP-0.86□□□□□ -2.55
SCARNA23-201ENST00000516060 PTPRUQ92729 1446 aa-0.86□□□□□ -2.55
SCARNA23-201ENST00000516060 TMEM120BA0PK00 339 aa-0.86□□□□□ -2.55
SCARNA23-201ENST00000516060 C5orf52A6NGY3 159 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms