RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 VLDLRP98155 873 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 SLC10A1Q14973 349 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 ENTPD8Q5MY95 495 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 ZNF613Q6PF04 617 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 DEF8Q6ZN54 512 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 PIWIL3Q7Z3Z3 882 aaKnown RBP19.02■□□□□ 0.64
LSM6-207ENST00000515311 GRINAQ7Z429 371 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 C10orf67Q8IYJ2 551 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 GTPBP8Q8N3Z3 284 aaPredicted RBP19.02■□□□□ 0.64
LSM6-207ENST00000515311 OR14L1PQ8NHC6 308 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 CANT1Q8WVQ1 401 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 NR4A3Q92570 626 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 ZNF524Q96C55 264 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 DUS3LQ96G46 650 aaKnown RBP19.02■□□□□ 0.64
LSM6-207ENST00000515311 TMEM27Q9HBJ8 222 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 NDUFAF4Q9P032 175 aa19.02■□□□□ 0.64
LSM6-207ENST00000515311 SEMA7AO75326 666 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 FABP3P05413 133 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 CELA3AP09093 270 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 OR1Q1Q15612 314 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 IQCCQ4KMZ1 466 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 CMPK2Q5EBM0 449 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 SWT1Q5T5J6 900 aaKnown RBP19.01■□□□□ 0.63
LSM6-207ENST00000515311 TSEN54Q7Z6J9 526 aaKnown RBP19.01■□□□□ 0.63
LSM6-207ENST00000515311 CYP4Z1Q86W10 505 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 ZDHHC21Q8IVQ6 265 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 CADM2Q8N3J6 435 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 PAPD5Q8NDF8 572 aaKnown RBP19.01■□□□□ 0.63
LSM6-207ENST00000515311 DNAJA4Q8WW22 397 aaPredicted RBP19.01■□□□□ 0.63
LSM6-207ENST00000515311 PRRC1Q96M27 445 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 ZNF300Q96RE9 604 aaPredicted RBP19.01■□□□□ 0.63
LSM6-207ENST00000515311 PRR14Q9BWN1 585 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 ADAM19Q9H013 955 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 CCM2LQ9NUG4 571 aaPredicted RBP19.01■□□□□ 0.63
LSM6-207ENST00000515311 RPS6KB2Q9UBS0 482 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 AURKCQ9UQB9 309 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 NTNG1Q9Y2I2 539 aa19.01■□□□□ 0.63
LSM6-207ENST00000515311 BSNQ9UPA5 3926 aa19■□□□□ 0.63
LSM6-207ENST00000515311 A0A1B0GWA3 101 aa19■□□□□ 0.63
LSM6-207ENST00000515311 TRAPPC13A5PLN9 417 aa19■□□□□ 0.63
LSM6-207ENST00000515311 hCG_2039718K7EN88 272 aa19■□□□□ 0.63
LSM6-207ENST00000515311 OR5F1O95221 314 aa19■□□□□ 0.63
LSM6-207ENST00000515311 IGHG3P01860 377 aa19■□□□□ 0.63
LSM6-207ENST00000515311 THRBP10828 461 aa19■□□□□ 0.63
LSM6-207ENST00000515311 RHCEP18577 417 aa19■□□□□ 0.63
LSM6-207ENST00000515311 ERFP50548 548 aa19■□□□□ 0.63
LSM6-207ENST00000515311 B3GALT5-AS1P59052 145 aa19■□□□□ 0.63
LSM6-207ENST00000515311 FOXF1Q12946 379 aa19■□□□□ 0.63
LSM6-207ENST00000515311 RAET1LQ5VY80 246 aa19■□□□□ 0.63
LSM6-207ENST00000515311 ZNF324BQ6AW86 544 aaPredicted RBP19■□□□□ 0.63
LSM6-207ENST00000515311 ULK3Q6PHR2 472 aa19■□□□□ 0.63
LSM6-207ENST00000515311 PLEKHM3Q6ZWE6 761 aa19■□□□□ 0.63
LSM6-207ENST00000515311 YRDCQ86U90 279 aaKnown RBP19■□□□□ 0.63
LSM6-207ENST00000515311 TSPYL5Q86VY4 417 aaPredicted RBP19■□□□□ 0.63
LSM6-207ENST00000515311 CISD2Q8N5K1 135 aaKnown RBP19■□□□□ 0.63
LSM6-207ENST00000515311 ADAMTS16Q8TE57 1224 aa19■□□□□ 0.63
LSM6-207ENST00000515311 BARD1Q99728 777 aaKnown RBP19■□□□□ 0.63
LSM6-207ENST00000515311 PIGQQ9BRB3 760 aa19■□□□□ 0.63
LSM6-207ENST00000515311 YY1AP1Q9H869 796 aa19■□□□□ 0.63
LSM6-207ENST00000515311 C12orf10Q9HB07 376 aa19■□□□□ 0.63
LSM6-207ENST00000515311 ACAD8Q9UKU7 415 aa19■□□□□ 0.63
LSM6-207ENST00000515311 A4GNTQ9UNA3 340 aa19■□□□□ 0.63
LSM6-207ENST00000515311 FAM32AQ9Y421 112 aaKnown RBP19■□□□□ 0.63
LSM6-207ENST00000515311 A0A0B4J2E0 115 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 A0A1B0GX12 115 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 CPSF4LA6NMK7 179 aaKnown RBP18.99■□□□□ 0.63
LSM6-207ENST00000515311 LINC01387J3KSC0 135 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 HCN1O60741 890 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 ELK4P28324 431 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 SLC7A1P30825 629 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 IFNA8P32881 189 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 APOBEC1P41238 236 aaKnown RBP18.99■□□□□ 0.63
LSM6-207ENST00000515311 POLR2HP52434 150 aaKnown RBP18.99■□□□□ 0.63
LSM6-207ENST00000515311 TAS2R41P59536 307 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 WIPI1Q5MNZ9 446 aaPredicted RBP18.99■□□□□ 0.63
LSM6-207ENST00000515311 POC1BQ8TC44 478 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 FAR1Q8WVX9 515 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 SLCO4A1Q96BD0 722 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 C3orf49Q96BT1 292 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 ZNF347Q96SE7 839 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 DEFB127Q9H1M4 99 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 PLSCR2Q9NRY7 297 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 SELENONQ9NZV5 590 aa18.99■□□□□ 0.63
LSM6-207ENST00000515311 RPH3AQ9Y2J0 694 aaPredicted RBP18.99■□□□□ 0.63
LSM6-207ENST00000515311 OR2M5A3KFT3 312 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 SUSD5O60279 629 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 PRSS23O95084 383 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 PNMTP11086 282 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 CHMP24386 653 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 TACR3P29371 465 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 GCKP35557 465 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 MAP2K6P52564 334 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 GFRA1P56159 465 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 MERTKQ12866 999 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 NFATC3Q12968 1075 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 PIN1Q13526 163 aaPredicted RBP18.98■□□□□ 0.63
LSM6-207ENST00000515311 ALG10BQ5I7T1 473 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 ATG4DQ86TL0 474 aaPredicted RBP18.98■□□□□ 0.63
LSM6-207ENST00000515311 OFCC1Q8IZS5 231 aa18.98■□□□□ 0.63
LSM6-207ENST00000515311 NEIL3Q8TAT5 605 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms