RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 OVCH1Q7RTY7 1134 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 ANKRD37Q7Z713 158 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 PRR22Q8IZ63 422 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 SLC34A3Q8N130 599 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 GATSQ8NAP1 163 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 NDNFQ8TB73 568 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 PHOSPHO1Q8TCT1 267 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 RNFT2Q96EX2 444 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 ADOQ96SZ5 270 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 PHOX2BQ99453 314 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 GTPBP2Q9BX10 602 aaKnown RBP13.71□□□□□ -0.22
VCAN-211ENST00000513984 TAPBPLQ9BX59 468 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 SEMA4CQ9C0C4 833 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 NRSN2Q9GZP1 204 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 FN3KQ9H479 309 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 OCIAD1Q9NX40 245 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 CLEC2DQ9UHP7 191 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 RALGAPA1Q6GYQ0 2036 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 PCNX3Q9H6A9 2034 aa13.71□□□□□ -0.22
VCAN-211ENST00000513984 A0A1W2PQD3 144 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 AGRPO00253 132 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 ZNF264O43296 627 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 OIP5O43482 229 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 AIREO43918 545 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 CSO75390 466 aaKnown RBP13.7□□□□□ -0.22
VCAN-211ENST00000513984 REM1O75628 298 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 CLPXO76031 633 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 HEXBP07686 556 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 SP9P0CG40 484 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 CDH11P55287 796 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 FOXL2P58012 376 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 NCS1P62166 190 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 LSM3P62310 102 aaKnown RBP13.7□□□□□ -0.22
VCAN-211ENST00000513984 CRYZQ08257 329 aaKnown RBP13.7□□□□□ -0.22
VCAN-211ENST00000513984 FHL1Q13642 323 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 FAAH2Q6GMR7 532 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 WBP2NLQ6ICG8 309 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 THSD4Q6ZMP0 1018 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 DYNC2LI1Q8TCX1 351 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 ENKD1Q9H0I2 346 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 APMAPQ9HDC9 416 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 HINT3Q9NQE9 182 aaKnown RBP13.7□□□□□ -0.22
VCAN-211ENST00000513984 VPS13AQ96RL7 3174 aa13.7□□□□□ -0.22
VCAN-211ENST00000513984 TRAV27A0A087WT01 109 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 SAGE2PA6NJ88 616 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 M0R3G1 203 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 ALOX12BO75342 701 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 SLC2A10O95528 541 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 SCG5P05408 212 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 HSMCR30P0CW71 290 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 ABCD3P28288 659 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 LIMK1P53667 647 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 PNLIPRP2P54317 469 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 PLCXD2Q0VAA5 305 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 IL11RAQ14626 422 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 SPHARQ15513 63 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 SLCO6A1Q86UG4 719 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 NFAM1Q8NET5 270 aaPredicted RBP13.69□□□□□ -0.22
VCAN-211ENST00000513984 OMA1Q96E52 524 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 OPALINQ96PE5 141 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 SLC19A3Q9BZV2 496 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 LAT2Q9GZY6 243 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 SLC26A1Q9H2B4 701 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 CMC2Q9NRP2 79 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 PPIEQ9UNP9 301 aaKnown RBP13.69□□□□□ -0.22
VCAN-211ENST00000513984 BAIAP2Q9UQB8 552 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 PCDHGA3Q9Y5H0 932 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 KIF26BQ2KJY2 2108 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 CDC14CA4D256 554 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 HTR3EA5X5Y0 456 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 GTPBP1O00178 669 aaKnown RBP13.69□□□□□ -0.22
VCAN-211ENST00000513984 CCRL2O00421 344 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 MYL12BO14950 172 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 IGF2P01344 180 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 INHBBP09529 407 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 ZNF883P0CG24 379 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 HTR1FP30939 366 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 UGT2B10P36537 528 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 ZFP36L1Q07352 338 aaKnown RBP13.69□□□□□ -0.22
VCAN-211ENST00000513984 TSTQ16762 297 aaKnown RBP13.69□□□□□ -0.22
VCAN-211ENST00000513984 CBLN3Q6UW01 205 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 PRR23CQ6ZRP0 262 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 CXXC5Q7LFL8 322 aaKnown RBP13.69□□□□□ -0.22
VCAN-211ENST00000513984 OAFQ86UD1 273 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 ATCAYQ86WG3 371 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 GID4Q8IVV7 300 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 BMPERQ8N8U9 685 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 APCDD1LQ8NCL9 501 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 TP53INP1Q96A56 240 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 MCCC2Q9HCC0 563 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 CARD8Q9Y2G2 431 aa13.69□□□□□ -0.22
VCAN-211ENST00000513984 EXOSC1Q9Y3B2 195 aaKnown RBP13.69□□□□□ -0.22
VCAN-211ENST00000513984 IGHV3-20A0A0C4DH32 117 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 TMEM129A0AVI4 362 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 FAM86C2PA6NEL3 165 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 ALG1L2C9J202 215 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 PPM1BO75688 479 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 CYC1P08574 325 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 PNMTP11086 282 aa13.68□□□□□ -0.22
VCAN-211ENST00000513984 MYL12AP19105 171 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms