RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 KLHL31Q9H511 634 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 NT5DC2Q9H857 520 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 ACTR8Q9H981 624 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CHODLQ9H9P2 273 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 PELI2Q9HAT8 420 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 PARVBQ9HBI1 364 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 LYRM4Q9HD34 91 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 MYOZ1Q9NP98 299 aaPredicted RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.22□□□□□ -1.897e-8■■■■■ 35
PDLIM5-218ENST00000513341 CHRAC1Q9NRG0 131 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 GLRX2Q9NS18 164 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 CBLN4Q9NTU7 201 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 MED29Q9NX70 200 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 TEX10Q9NXF1 929 aaPredicted RBP3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 MS4A12Q9NXJ0 267 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 GRHPRQ9UBQ7 328 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SLC2A6Q9UGQ3 507 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 DHRS7Q9Y394 339 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 SPACA6W5XKT8 324 aa3.22□□□□□ -1.89
PDLIM5-218ENST00000513341 GOLGA8QA0A0J9YX86 632 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 C2orf92A0A1B0GVN3 265 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 LOC390937A0A1W2PQ73 354 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 GOLGA8OA6NCC3 632 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 GOLGA8NF8WBI6 632 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 GOLGA8RI6L899 631 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 SMAD9O15198 467 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 CLOCKO15516 846 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 DHHO43323 396 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 SPOPO43791 374 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 ICOSLGO75144 302 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 NIPSNAP2O75323 286 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 FGF2P09038 288 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 FCGR2AP12318 317 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 APEHP13798 732 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 ZNF23P17027 643 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 OGNP20774 298 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 SAT1P21673 171 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 RPL22P35268 128 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 HNF4AP41235 474 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 NPY2RP49146 381 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 STARP49675 285 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 PDLIM4P50479 330 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 HNRNPFP52597 415 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 HADHBP55084 474 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 HNRNPH2P55795 449 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 AP1S2P56377 157 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 SLC37A1P57057 533 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 RPS3AP61247 264 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 IRX1P78414 480 aaPredicted RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 CHRNB3Q05901 458 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 TGM3Q08188 693 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 P2RY6Q15077 328 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 ASTE1Q2TB18 679 aaPredicted RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 KRT71Q3SY84 523 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 TBRG1Q3YBR2 411 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 GLE1Q53GS7 698 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 AWAT1Q58HT5 328 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 RNASE12Q5GAN4 147 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 C11orf71Q6IPW1 123 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 UGT3A1Q6NUS8 523 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 TRIM40Q6P9F5 258 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 ZNF793Q6ZN11 406 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 IL17RELQ6ZVW7 336 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 BCDIN3DQ7Z5W3 292 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 TRABD2AQ86V40 505 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 P2RY8Q86VZ1 359 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 PLCZ1Q86YW0 608 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 CCDC50Q8IVM0 306 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 KLHDC8AQ8IYD2 350 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 ST13P4Q8IZP2 240 aaPredicted RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 BANPQ8N9N5 519 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 WDSUB1Q8N9V3 476 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 ATG16L2Q8NAA4 619 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 BBOF1Q8ND07 529 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 OR2L5Q8NG80 312 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 OR52L2PQ8NGH6 319 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 GLMPQ8WWB7 406 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 SLC5A11Q8WWX8 675 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 KRT35Q92764 455 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 TANKQ92844 425 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 MRPL24Q96A35 216 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 GMPPAQ96IJ6 420 aaPredicted RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 PIMREGQ9BSJ6 248 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 TMEM120AQ9BXJ8 343 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 HEMGNQ9BXL5 484 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 CAPS2Q9BXY5 557 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 ACTR6Q9GZN1 396 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 WWTR1Q9GZV5 400 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 SLITRK2Q9H156 845 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 HSD3B7Q9H2F3 369 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 C10orf88Q9H8K7 445 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 KCNK9Q9NPC2 374 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 TREX1Q9NSU2 369 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 INTS10Q9NVR2 710 aaKnown RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 PAQR5Q9NXK6 330 aaPredicted RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 TAS2R10Q9NYW0 307 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 MARCH4Q9P2E8 410 aaPredicted RBP3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 GALPQ9UBC7 116 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 MGAT4BQ9UQ53 548 aa3.21□□□□□ -1.9
PDLIM5-218ENST00000513341 PDE10AQ9Y233 779 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms