RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SENP5Q96HI0 755 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 TPD52L3Q96J77 140 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 PRRC1Q96M27 445 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 SIGLEC12Q96PQ1 595 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 G6PC3Q9BUM1 346 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 YIPF2Q9BWQ6 316 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 YTHDF1Q9BYJ9 559 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 VN1R1Q9GZP7 353 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 OR10A5Q9H207 317 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 ARMC7Q9H6L4 198 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 CACYBPQ9HB71 228 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 Q9N2J8 555 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 ACER3Q9NUN7 267 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 KLHL28Q9NXS3 571 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 VNN3Q9NY84 501 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 TMEFF2Q9UIK5 374 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 ZNF232Q9UNY5 417 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 GPR55Q9Y2T6 319 aaPredicted RBP9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 SAMHD1Q9Y3Z3 626 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 FAM32AQ9Y421 112 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 HRH3Q9Y5N1 445 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 HSPE1-MOB4S4R3N1 261 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 AKAP6Q13023 2319 aa9.57□□□□□ -0.88
PDLIM5-217ENST00000512274 SCN2AQ99250 2005 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 MAGEA13PA6NCF6 341 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 TRIM64A6NGJ6 449 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 FRG2CA6NGY1 282 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 C17orf105B2RV13 164 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 PDLIM1O00151 329 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 SMAD7O15105 426 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 E2F6O75461 281 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 CDC123O75794 336 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 KCNK2O95069 426 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 SERPINA7P05543 415 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 TPOP07202 933 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 NGFRP08138 427 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 ZGLP1P0C6A0 271 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 CHRNB4P30926 498 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 HOXC12P31275 282 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 CAPGP40121 348 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 EEF1A1P68104 462 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 OCA2Q04671 838 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 ZNF155Q12901 538 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 MICAQ29983 383 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 DEFB113Q30KQ7 82 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 ZNF311Q5JNZ3 666 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 FCRLBQ6BAA4 426 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 TBPL2Q6SJ96 375 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 CD300LDQ6UXZ3 194 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 FGD2Q7Z6J4 655 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 TMEM179BQ7Z7N9 219 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 CD163Q86VB7 1156 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 CDC20BQ86Y33 519 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 PHC2Q8IXK0 858 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 DHRSXQ8N5I4 330 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 ZNF441Q8N8Z8 693 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 SMYD1Q8NB12 490 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 OR52P1PQ8NH57 321 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 ZNF721Q8TF20 911 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 SLC9A6Q92581 669 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 GABARAPL3Q9BY60 117 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 HOXD1Q9GZZ0 328 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 RNF32Q9H0A6 362 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 EQTNQ9NQ60 294 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 ANKRD10Q9NXR5 420 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 MRTO4Q9UKD2 239 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 A4GNTQ9UNA3 340 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 EDARQ9UNE0 448 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 CHST2Q9Y4C5 530 aa9.56□□□□□ -0.88
PDLIM5-217ENST00000512274 LOC102723996A0A087X1L8 192 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 CDHR4A6H8M9 788 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 FAM171A2A8MVW0 826 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 hCG_2039718K7EN88 272 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 TNFRSF11BO00300 401 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 FAAHO00519 579 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 FFAR1O14842 300 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 FCMRO60667 390 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 OR5F1O95221 314 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 ADAP00813 363 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 ENDOUP21128 410 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 RRM2P31350 389 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 GABRA3P34903 492 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 DLX5P56178 289 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 KEAP1Q14145 624 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 ZNF267Q14586 743 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 EXOSC7Q15024 291 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 PDK3Q15120 406 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 NSDHLQ15738 373 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 ZNF770Q6IQ21 691 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 UGT2A3Q6UWM9 527 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 CIARTQ8N365 385 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 GALNT4Q8N4A0 578 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 RPRMLQ8N4K4 120 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 SIMC1Q8NDZ2 872 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 NUBPLQ8TB37 319 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 SLC2A12Q8TD20 617 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 MAGEE2Q8TD90 523 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 GPR151Q8TDV0 419 aa9.55□□□□□ -0.88
PDLIM5-217ENST00000512274 GIPC3Q8TF64 312 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms