RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 PRRG4Q9BZD6 226 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 ENKD1Q9H0I2 346 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 SAR1AQ9NR31 198 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 ACER3Q9NUN7 267 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 THUMPD1Q9NXG2 353 aaKnown RBP12.54□□□□□ -0.4
DDX41-212ENST00000511040 KLHL14Q9P2G3 628 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 CLEC4AQ9UMR7 237 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 ZNF443Q9Y2A4 671 aaPredicted RBP12.54□□□□□ -0.4
DDX41-212ENST00000511040 ZNF175Q9Y473 711 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 DSPPQ9NZW4 1301 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 PKDREJQ9NTG1 2253 aa12.54□□□□□ -0.4
DDX41-212ENST00000511040 A0A0G2JPF8 293 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 HNRNPCL2B2RXH8 293 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 HNRNPCL3B7ZW38 293 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 FBP2O00757 339 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 HNRNPCL1O60812 293 aaKnown RBP12.53□□□□□ -0.4
DDX41-212ENST00000511040 TNFSF13O75888 250 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 SMNDC1O75940 238 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDX41-212ENST00000511040 SYNGR4O95473 234 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 IL18BPO95998 194 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 GKN3PP0CG01 181 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 HNRNPCL4P0DMR1 293 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 BMP2P12643 396 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 IGFBP2P18065 325 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 CCNA2P20248 432 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 PPIBP23284 216 aaKnown RBP12.53□□□□□ -0.4
DDX41-212ENST00000511040 IDH2P48735 452 aaKnown RBP12.53□□□□□ -0.4
DDX41-212ENST00000511040 GYS2P54840 703 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 CARD18P57730 90 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 MTPNP58546 118 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 GNA13Q14344 377 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 LIN52Q52LA3 116 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 RUNDC3AQ59EK9 446 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 PDSS1Q5T2R2 415 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 VWA1Q6PCB0 445 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 PLEKHM3Q6ZWE6 761 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 LURAP1LQ8IV03 231 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 DMRTC2Q8IXT2 367 aaPredicted RBP12.53□□□□□ -0.4
DDX41-212ENST00000511040 CMIPQ8IY22 773 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 ZNF295-AS1Q8N0V1 137 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 CLIP4Q8N3C7 705 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 DPP10Q8N608 796 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 ACBD4Q8NC06 268 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 C10orf82Q8WW14 230 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 TMEM234Q8WY98 164 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 ROBO4Q8WZ75 1007 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 ST8SIA1Q92185 356 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 DNAJA3Q96EY1 480 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 ZFP3Q96NJ6 502 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 SRXN1Q9BYN0 137 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 RNF122Q9H9V4 155 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 CACYBPQ9HB71 228 aaKnown RBP12.53□□□□□ -0.4
DDX41-212ENST00000511040 EXOSC3Q9NQT5 275 aaKnown RBP12.53□□□□□ -0.4
DDX41-212ENST00000511040 CELSR2Q9HCU4 2923 aa12.53□□□□□ -0.4
DDX41-212ENST00000511040 ADGRG4Q8IZF6 3080 aa12.52□□□□□ -0.4
DDX41-212ENST00000511040 GJE1A6NN92 205 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 EVPLLA8MZ36 301 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 ETV2O00321 342 aaPredicted RBP12.52□□□□□ -0.41
DDX41-212ENST00000511040 SYT5O00445 386 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 PGM3O95394 542 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 ARAFP10398 606 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 GPX2P18283 190 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 AQP1P29972 269 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 SLC7A1P30825 629 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 KIR2DL2P43627 348 aaPredicted RBP12.52□□□□□ -0.41
DDX41-212ENST00000511040 CPA2P48052 419 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 SEC24CP53992 1094 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 EEF1A1P68104 462 aaKnown RBP12.52□□□□□ -0.41
DDX41-212ENST00000511040 CDK6Q00534 326 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 SELENBP1Q13228 472 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 LARS2Q15031 903 aaKnown RBP12.52□□□□□ -0.41
DDX41-212ENST00000511040 OR2A2Q6IF42 318 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 BTLAQ7Z6A9 289 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 SNX32Q86XE0 403 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 BBS10Q8TAM1 723 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 TSPEARQ8WU66 669 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 PMM1Q92871 262 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 RNASE6Q93091 150 aaKnown RBP12.52□□□□□ -0.41
DDX41-212ENST00000511040 OR5B2Q96R09 309 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 CGREF1Q99674 301 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 SLC39A3Q9BRY0 314 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 FAM107BQ9H098 131 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 COQ10BQ9H8M1 238 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 CTPS2Q9NRF8 586 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 JKAMPQ9P055 326 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 ARMCX1Q9P291 453 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 MCTS1Q9ULC4 181 aaKnown RBP12.52□□□□□ -0.41
DDX41-212ENST00000511040 CHST2Q9Y4C5 530 aa12.52□□□□□ -0.41
DDX41-212ENST00000511040 IGHV3-15A0A0B4J1V0 119 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 LOC100653049A0A140TA62 436 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 CDHR4A6H8M9 788 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 CFAP73A6NFT4 308 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 KRT34O76011 436 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 PLGP00747 810 aaPredicted RBP12.51□□□□□ -0.41
DDX41-212ENST00000511040 THBS1P07996 1170 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 TFPIP10646 304 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 FCGR2AP12318 317 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 PRG2P13727 222 aa12.51□□□□□ -0.41
DDX41-212ENST00000511040 KLK2P20151 261 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms