RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 ACTL6AO96019 429 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 SERPINA1P01009 418 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 FESP07332 822 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 GP1BBP13224 206 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 HSD17B1P14061 328 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 CCNA2P20248 432 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 HTR2AP28223 471 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 HTR1EP28566 365 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 SHC1P29353 583 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 SFTPDP35247 375 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 ACAA2P42765 397 aaKnown RBP9.4□□□□□ -0.9
NR1I3-227ENST00000510951 KCNJ5P48544 419 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 LHX2P50458 406 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 TPD52P55327 224 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-227ENST00000510951 MERTKQ12866 999 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 ZSWIM7Q19AV6 140 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 TMEM44Q2T9K0 475 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 DNAL1Q4LDG9 190 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 WLSQ5T9L3 541 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 VASNQ6EMK4 673 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 ZNF585AQ6P3V2 769 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 ENPP6Q6UWR7 440 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 C6orf89Q6UWU4 347 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 PLEKHM3Q6ZWE6 761 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 GRAMD2AQ8IUY3 354 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 GTPBP8Q8N3Z3 284 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-227ENST00000510951 BHLHE22Q8NFJ8 381 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-227ENST00000510951 OR4D11Q8NGI4 311 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 FAM57AQ8TBR7 257 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 TMEM234Q8WY98 164 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 ST8SIA1Q92185 356 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 PROX1Q92786 737 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 SLC7A6OSQ96CW6 309 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-227ENST00000510951 DNAJA3Q96EY1 480 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 MRGPRX4Q96LA9 322 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 TIMP4Q99727 224 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 ARHGDIGQ99819 225 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 THTPAQ9BU02 230 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 PCDHAC1Q9H158 963 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 CTPS2Q9NRF8 586 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 KLHL28Q9NXS3 571 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 CD300AQ9UGN4 299 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 MAGEL2Q9UJ55 1249 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 ZNF835Q9Y2P0 537 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 MRPS18CQ9Y3D5 142 aaKnown RBP9.4□□□□□ -0.9
NR1I3-227ENST00000510951 ZNF337Q9Y3M9 751 aa9.4□□□□□ -0.9
NR1I3-227ENST00000510951 J3QKU1 62 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 SYT5O00445 386 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 GMNNO75496 209 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 IFNA14P01570 189 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 ME2P23368 584 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 CHMP24386 653 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 PSMA4P25789 261 aaKnown RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 TACR3P29371 465 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 EIF1P41567 113 aaKnown RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 OR1E2P47887 323 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 ZNF136P52737 540 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 CASP6P55212 293 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 CLDN18P56856 261 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 CLDN20P56880 219 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 COPZ1P61923 177 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 NPTX1Q15818 432 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 NRF1Q16656 503 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 GLYR1Q49A26 553 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 GXYLT1Q4G148 440 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 NHSL2Q5HYW2 709 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 EMC4Q5J8M3 183 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 GLYATQ6IB77 296 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 PLXDC2Q6UX71 529 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 DEF8Q6ZN54 512 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 NCCRP1Q6ZVX7 275 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 GRINAQ7Z429 371 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 VTCN1Q7Z7D3 282 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 FJX1Q86VR8 437 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 RANBP3LQ86VV4 465 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 CARM1Q86X55 608 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 RBM45Q8IUH3 476 aaKnown RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 RPRMLQ8N4K4 120 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 OR52E4Q8NGH9 312 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 OR6T1Q8NGN1 323 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 RNF217Q8TC41 542 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 RASSF5Q8WWW0 418 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 WDYHV1Q96HA8 205 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 HSH2DQ96JZ2 352 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 C1orf21Q9H246 121 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 ACER3Q9NUN7 267 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 ADPRHL2Q9NX46 363 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 RPS6KB2Q9UBS0 482 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 TESQ9UGI8 421 aaKnown RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 PRPF19Q9UMS4 504 aaKnown RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 SH3GLB1Q9Y371 365 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 SNX13Q9Y5W8 968 aa9.39□□□□□ -0.91
NR1I3-227ENST00000510951 INTS1Q8N201 2190 aaKnown RBP9.39□□□□□ -0.91
NR1I3-227ENST00000510951 NCOA6Q14686 2063 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-227ENST00000510951 FIGNL2A6NMB9 653 aa9.38□□□□□ -0.91
NR1I3-227ENST00000510951 CPSF4LA6NMK7 179 aaKnown RBP9.38□□□□□ -0.91
NR1I3-227ENST00000510951 TMEM229AB2RXF0 380 aa9.38□□□□□ -0.91
NR1I3-227ENST00000510951 KDM4EB2RXH2 506 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms