RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ZWILCHQ9H900 591 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 CFAP45Q9UL16 551 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 TDRKHQ9Y2W6 561 aaKnown RBP5.34□□□□□ -1.55
USP53-206ENST00000510737 A0A0A6YYC8 382 aaPredicted RBP5.33□□□□□ -1.56
USP53-206ENST00000510737 ARHGEF33A8MVX0 844 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 I3L1I5 382 aaPredicted RBP5.33□□□□□ -1.56
USP53-206ENST00000510737 GFPT2O94808 682 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 GLSO94925 669 aaPredicted RBP5.33□□□□□ -1.56
USP53-206ENST00000510737 CALB1P05937 261 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 GABRA1P14867 456 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 PSMA2P25787 234 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 LOXP28300 417 aaPredicted RBP5.33□□□□□ -1.56
USP53-206ENST00000510737 PCK1P35558 622 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 PAFAH1B1P43034 410 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 MAGEA5P43359 124 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 NSFP46459 744 aaKnown RBP5.33□□□□□ -1.56
USP53-206ENST00000510737 SLC6A12P48065 614 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 PRLHRP49683 370 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 SLC26A5P58743 744 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 DPYSL2Q16555 572 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 WLSQ5T9L3 541 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 CDC73Q6P1J9 531 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 LRRC8BQ6P9F7 803 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 DCUN1D2Q6PH85 259 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 DNM1P46Q6ZS02 220 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 Q6ZSR9 355 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 ABHD13Q7L211 337 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 MAATS1Q7Z4T9 603 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 PLD3Q8IV08 490 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 TBC1D21Q8IYX1 336 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 GCSAMQ8N6F7 178 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 C1orf52Q8N6N3 182 aaKnown RBP5.33□□□□□ -1.56
USP53-206ENST00000510737 NFKBIDQ8NI38 313 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 PIK3IP1Q96FE7 263 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 IMP4Q96G21 291 aaKnown RBP5.33□□□□□ -1.56
USP53-206ENST00000510737 CABS1Q96KC9 395 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 GFI1Q99684 422 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 SHARPINQ9H0F6 387 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 SMOXQ9NWM0 555 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 SPRR3Q9UBC9 169 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 ASF1AQ9Y294 204 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 DYSFO75923 2080 aa5.33□□□□□ -1.56
USP53-206ENST00000510737 VWFP04275 2813 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 A0A0G2JMM0 328 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 A0A1W2PPB8 328 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 A0A1W2PRS3 328 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 AGAP14A8MT82 685 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 KIR3DP1A8MWS1 328 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 F8VZ95 297 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 H0YGG7 62 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 KCNK1O00180 336 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 EPPINO95925 133 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 ATP1B2P14415 290 aaPredicted RBP5.32□□□□□ -1.56
USP53-206ENST00000510737 UCHL3P15374 230 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 CD9P21926 228 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 HRH2P25021 359 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 SHC1P29353 583 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 ARF3P61204 181 aaPredicted RBP5.32□□□□□ -1.56
USP53-206ENST00000510737 PLGLB1Q02325 96 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 ACTN3Q08043 901 aaPredicted RBP5.32□□□□□ -1.56
USP53-206ENST00000510737 AP1B1Q10567 949 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 RPA4Q13156 261 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 MAMLD1Q13495 774 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 GRB7Q14451 532 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 SLC10A1Q14973 349 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 TYSND1Q2T9J0 566 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 HKDC1Q2TB90 917 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 CTU2Q2VPK5 515 aaKnown RBP5.32□□□□□ -1.56
USP53-206ENST00000510737 SFT2D3Q587I9 215 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 LRIF1Q5T3J3 769 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 ZDHHC20Q5W0Z9 365 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 RGS9BPQ6ZS82 235 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 IL17RELQ6ZVW7 336 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 OTOAQ7RTW8 1153 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 TMEM251Q8N6I4 163 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 OR2M7Q8NG81 312 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 OR5K2Q8NHB8 316 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 HTRA1Q92743 480 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 SMARCE1Q969G3 411 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 ZMYND19Q96E35 227 aaPredicted RBP5.32□□□□□ -1.56
USP53-206ENST00000510737 WFIKKN1Q96NZ8 548 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 TTTY12Q9BZ98 90 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 SH2D2AQ9NP31 389 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 C19orf25Q9UFG5 118 aaPredicted RBP5.32□□□□□ -1.56
USP53-206ENST00000510737 CIDEBQ9UHD4 219 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 MAN1B1Q9UKM7 699 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 WIF1Q9Y5W5 379 aa5.32□□□□□ -1.56
USP53-206ENST00000510737 CR1P17927 2039 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 A0A087WW49 117 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 A0A096LNT2 108 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 LOC285095A0A1B0GVY8 99 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 ATP6AP2A0A1C7CYW4 349 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 BICDL2A1A5D9 508 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 EEF1E1-BLOC1S5C9J1V9 151 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 G3V3Y1 287 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 EEF1E1O43324 174 aaKnown RBP5.31□□□□□ -1.56
USP53-206ENST00000510737 MFSD11O43934 449 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 PAGE4O60829 102 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 ATP6AP2O75787 350 aa5.31□□□□□ -1.56
USP53-206ENST00000510737 SRP72O76094 671 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms