RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CTSAP10619 480 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 PTH2RP49190 550 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 ACTC1P68032 377 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 ACTA1P68133 377 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 ENPP2Q13822 863 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 HNRNPA1L2Q32P51 320 aaKnown RBP13.86□□□□□ -0.19
USP38-202ENST00000510377 C3P1Q6ZMU1 363 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 METTL27Q8N6F8 245 aaPredicted RBP13.86□□□□□ -0.19
USP38-202ENST00000510377 NSMAFQ92636 917 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 SOHLH2Q9NX45 425 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 KLHL9Q9P2J3 617 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 A0A1W2PS29 197 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 TRABD2BA6NFA1 517 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 UCHL1P09936 223 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 ITGB7P26010 798 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 KIAA1024LP59773 190 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 GLYR1Q49A26 553 aaPredicted RBP13.86□□□□□ -0.19
USP38-202ENST00000510377 MBOAT2Q6ZWT7 520 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 ZNF761Q86XN6 746 aaPredicted RBP13.86□□□□□ -0.19
USP38-202ENST00000510377 OR52N1Q8NH53 320 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 NXPE3Q969Y0 559 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 MSLNLQ96KJ4 702 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 MS4A4EQ96PG1 132 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 KXD1Q9BQD3 176 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 ASB6Q9NWX5 421 aa13.86□□□□□ -0.19
USP38-202ENST00000510377 SEC16AO15027 2179 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 GREB1Q4ZG55 1949 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 XKRYO14609 159 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 PKLRP30613 574 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 SKP1P63208 163 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 CAMK2BQ13554 666 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 TRAM1Q15629 374 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 GRK1Q15835 563 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 TCTE1Q5JU00 501 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 HLA-DQA1Q5Y7H0 255 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 ELP4Q96EB1 424 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 CNRIP1Q96F85 164 aaPredicted RBP13.85□□□□□ -0.19
USP38-202ENST00000510377 NARFLQ9H6Q4 476 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 LYARQ9NX58 379 aaKnown RBP13.85□□□□□ -0.19
USP38-202ENST00000510377 GPR34Q9UPC5 381 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 BRCA1P38398 1863 aaKnown RBP13.85□□□□□ -0.19
USP38-202ENST00000510377 LIPCP11150 499 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 CEBPBP17676 345 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 FPR3P25089 353 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 PSMA3P25788 255 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 SOX9P48436 509 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 TAF13Q15543 124 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 RAB30Q15771 203 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 ZNF628Q5EBL2 1059 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 ZNF620Q6ZNG0 422 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 SLC6A18Q96N87 628 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 NOX3Q9HBY0 568 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 SCN3AQ9NY46 2000 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 A0A1W2PQU0 124 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 LRIT2A6NDA9 550 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 B8ZZF3 427 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 SLC25A12O75746 678 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 APODP05090 189 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 VAMP1P23763 118 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 REEP5Q00765 189 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 FOXK2Q01167 660 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 OPCMLQ14982 345 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 AGERQ15109 404 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 Q5BKY6 102 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 TMEM215Q68D42 235 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 CASTOR1Q8WTX7 329 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 AUNIPQ9H7T9 357 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 FGF20Q9NP95 211 aaPredicted RBP13.85□□□□□ -0.19
USP38-202ENST00000510377 STARD5Q9NSY2 213 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 COPS3Q9UNS2 423 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 PLEKHA6Q9Y2H5 1048 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 NOP16Q9Y3C1 178 aaKnown RBP13.85□□□□□ -0.19
USP38-202ENST00000510377 PSME4Q14997 1843 aa13.85□□□□□ -0.19
USP38-202ENST00000510377 A0A1W2PPL8 197 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 ADAM8P78325 824 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 EXOSC2Q13868 293 aaKnown RBP13.84□□□□□ -0.19
USP38-202ENST00000510377 LRRN1Q6UXK5 716 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 KRT77Q7Z794 578 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 SLC38A6Q8IZM9 456 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 POMGNT2Q8NAT1 580 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 OR56B4Q8NH76 319 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 ZNF471Q9BX82 626 aaPredicted RBP13.84□□□□□ -0.19
USP38-202ENST00000510377 TVP23AA6NH52 213 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 DVL2O14641 736 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 RAF1P04049 648 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 DBIP07108 87 aaKnown RBP13.84□□□□□ -0.19
USP38-202ENST00000510377 TRHRP34981 398 aaPredicted RBP13.84□□□□□ -0.19
USP38-202ENST00000510377 ERVK-25P63136 954 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 CLPPQ16740 277 aaPredicted RBP13.84□□□□□ -0.19
USP38-202ENST00000510377 DEFB110Q30KQ9 67 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 JAGN1Q8N5M9 183 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 SYNPRQ8TBG9 265 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 FOXN4Q96NZ1 517 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 SIGLEC11Q96RL6 698 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 TMEM185BQ9H7F4 350 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 SCP2D1Q9UJQ7 156 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 C11orf98E9PRG8 122 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 GOSR2O14653 212 aa13.84□□□□□ -0.19
USP38-202ENST00000510377 KHNYNO15037 678 aaKnown RBP13.84□□□□□ -0.19
USP38-202ENST00000510377 SURF4O15260 269 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms