RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ITCHQ96J02 903 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 SFXN2Q96NB2 322 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 ZBTB18Q99592 522 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 TREX2Q9BQ50 279 aaPredicted RBP6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 SRXN1Q9BYN0 137 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 TBL1XR1Q9BZK7 514 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 MYLK2Q9H1R3 596 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 TP63Q9H3D4 680 aaPredicted RBP6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 KLHL14Q9P2G3 628 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 B4GALT7Q9UBV7 327 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 ING1Q9UK53 422 aaPredicted RBP6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 DKKL1Q9UK85 242 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 FAF1Q9UNN5 650 aaPredicted RBP6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 CAMK2AQ9UQM7 478 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 ZNF337Q9Y3M9 751 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 VPS13CQ709C8 3753 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 POLQO75417 2590 aa6.48□□□□□ -1.37
TOPBP1-207ENST00000509162 ZNF469Q96JG9 3925 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 ANKHD1Q8IWZ3 2542 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 INTS1Q8N201 2190 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 A0A0J9YW62 118 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 A0A1W2PP18 115 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 MBD3L4A6NDZ8 208 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 MBD3L3A6NE82 208 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 AGAP5A6NIR3 686 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 MBD3L5A6NJ08 208 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 CLCA1A8K7I4 914 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 ZNF814B7Z6K7 855 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 H3BML4 177 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 FAM229AH3BQW9 127 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 LINC01387J3KSC0 135 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 SEC14L5O43304 696 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 WDR1O75083 606 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 STX11O75558 287 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 CBR3O75828 277 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 TNFSF13O75888 250 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 AQP8O94778 261 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 AK1P00568 194 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 VIMP08670 466 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 KRT16P08779 473 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 UBTFL6P0CB48 400 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 UBL4AP11441 157 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 PEPDP12955 493 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 CPN1P15169 458 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 ZNF17P17021 662 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 FUT4P22083 530 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 LSP1P33241 339 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 NTF4P34130 210 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 ARFIP2P53365 341 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 DSTNP60981 165 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 STX1BP61266 288 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 RBPJQ06330 500 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 GANABQ14697 944 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 TOMM20Q15388 145 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 RUNDC3AQ59EK9 446 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 SLC25A53Q5H9E4 307 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 MRPL2Q5T653 305 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 NSUN5P2Q63ZY6 315 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 C8orf82Q6P1X6 216 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 B3GNT6Q6ZMB0 384 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 LRRC74BQ6ZQY2 392 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 NET1Q7Z628 596 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 SNX32Q86XE0 403 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 ZZZ3Q8IYH5 903 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 ZNF808Q8N4W9 903 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 METTL25Q8N6Q8 603 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 POU5F2Q8N7G0 328 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 ZNF614Q8N883 585 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 GPR32P1Q8NGA4 272 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 OR4D11Q8NGI4 311 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 B4GALNT2Q8NHY0 566 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 MBD3L2Q8NHZ7 208 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 NFKBIDQ8NI38 313 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 PHOSPHO1Q8TCT1 267 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 SMPDL3BQ92485 455 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 NINJ1Q92982 152 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 KISS1RQ969F8 398 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 SARAFQ96BY9 339 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 SDCCAG3Q96C92 435 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 CCDC106Q9BWC9 280 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 WNT10AQ9GZT5 417 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 LDAHQ9H6V9 325 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 A4GALTQ9NPC4 353 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 RLIMQ9NVW2 624 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 ZNF443Q9Y2A4 671 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 MRPS18CQ9Y3D5 142 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 WDR45Q9Y484 360 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 DTNAQ9Y4J8 743 aa6.47□□□□□ -1.37
TOPBP1-207ENST00000509162 CD8B2A6NJW9 211 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 H0Y3Z8 333 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 CLIC1O00299 241 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 SCDO00767 359 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 TPST1O60507 370 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 TPST2O60704 377 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 RAMP1O60894 148 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 ACTL6AO96019 429 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 GP1BBP13224 206 aa6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 NCF2P19878 526 aaPredicted RBP6.46□□□□□ -1.38
TOPBP1-207ENST00000509162 POU3F2P20265 443 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms