RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 CACYBPQ9HB71 228 aaKnown RBP16.69■□□□□ 0.26
UBE3D-207ENST00000509102 GP6Q9HCN6 339 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 KCNE5Q9UJ90 142 aa16.69■□□□□ 0.26
UBE3D-207ENST00000509102 ETV2O00321 342 aaPredicted RBP16.68■□□□□ 0.26
UBE3D-207ENST00000509102 NTN1O95631 604 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 UQCRBP14927 111 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 CDKN2CP42773 168 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 POLR2JP52435 117 aaKnown RBP16.68■□□□□ 0.26
UBE3D-207ENST00000509102 KCNJ10P78508 379 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 CHRNEQ04844 493 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 MERTKQ12866 999 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 C6orf10Q5SRN2 563 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 DNAJC14Q6Y2X3 702 aaPredicted RBP16.68■□□□□ 0.26
UBE3D-207ENST00000509102 SPNS3Q6ZMD2 512 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 LRRC74BQ6ZQY2 392 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 FCRLAQ7L513 359 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 OLIG3Q7RTU3 272 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 CMIPQ8IY22 773 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 PNPT1Q8TCS8 783 aaKnown RBP16.68■□□□□ 0.26
UBE3D-207ENST00000509102 RNF128Q8TEB7 428 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 ROBO4Q8WZ75 1007 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 OR52B2Q96RD2 323 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 MTHFD2LQ9H903 347 aaPredicted RBP16.68■□□□□ 0.26
UBE3D-207ENST00000509102 TCF7L2Q9NQB0 619 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 EXOSC3Q9NQT5 275 aaKnown RBP16.68■□□□□ 0.26
UBE3D-207ENST00000509102 KLHL28Q9NXS3 571 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 CALML5Q9NZT1 146 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 P2RX2Q9UBL9 471 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 METRNQ9UJH8 293 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 MPDZO75970 2070 aa16.68■□□□□ 0.26
UBE3D-207ENST00000509102 CENPVL1A0A0U1RR11 272 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 HMGB1P1B2RPK0 211 aaPredicted RBP16.67■□□□□ 0.26
UBE3D-207ENST00000509102 PRKD3O94806 890 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 PPP3CBP16298 524 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 IL7RP16871 459 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 FKBP2P26885 142 aaKnown RBP16.67■□□□□ 0.26
UBE3D-207ENST00000509102 SHC1P29353 583 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 AGTR1P30556 359 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 RYKP34925 604 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 PGM1P36871 562 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 APOBEC1P41238 236 aaKnown RBP16.67■□□□□ 0.26
UBE3D-207ENST00000509102 CRATP43155 626 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 IST1P53990 364 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 SESN3P58005 492 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 RAC3P60763 192 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 CSNK2A1P68400 391 aaPredicted RBP16.67■□□□□ 0.26
UBE3D-207ENST00000509102 FUT5Q11128 374 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 KEAP1Q14145 624 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 POU4F3Q15319 338 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 MAPK14Q16539 360 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 SYPL1Q16563 259 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 AP1ARQ63HQ0 302 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 EPGNQ6UW88 154 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 MAVSQ7Z434 540 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 PEX5LQ8IYB4 626 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 FAM71CQ8NEG0 241 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 WFIKKN1Q96NZ8 548 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 OR5B2Q96R09 309 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 ACER3Q9NUN7 267 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 THUMPD1Q9NXG2 353 aaKnown RBP16.67■□□□□ 0.26
UBE3D-207ENST00000509102 KLHL9Q9P2J3 617 aa16.67■□□□□ 0.26
UBE3D-207ENST00000509102 FAM234BA2RU67 622 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 EFNA2O43921 213 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 DNAJA2O60884 412 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 RAF1P04049 648 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 HRGP04196 525 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 DBIP07108 87 aaKnown RBP16.66■□□□□ 0.26
UBE3D-207ENST00000509102 ZCCHC18P0CG32 403 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 ENPP1P22413 925 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 TESK1Q15569 626 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 PAMR1Q6UXH9 720 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 PLEKHM3Q6ZWE6 761 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 ANKFN1Q8N957 763 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 ABHD3Q8WU67 409 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 WDR60Q8WVS4 1066 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 ZHX1-C8orf76Q96EF9 292 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 FOXC2Q99958 501 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 SRXN1Q9BYN0 137 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 RAD21L1Q9H4I0 556 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 C12orf49Q9H741 205 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 VIPAS39Q9H9C1 493 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 CCM2LQ9NUG4 571 aaPredicted RBP16.66■□□□□ 0.26
UBE3D-207ENST00000509102 INTS9Q9NV88 658 aaKnown RBP16.66■□□□□ 0.26
UBE3D-207ENST00000509102 KLHL13Q9P2N7 655 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 PLEKHA6Q9Y2H5 1048 aa16.66■□□□□ 0.26
UBE3D-207ENST00000509102 A0A1W2PNR3 127 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 AGAP5A6NIR3 686 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 TFPIP10646 304 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 HTR3AP46098 478 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 CRISP3P54108 245 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 SYT14P1Q58G82 188 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 TTMPQ5BVD1 217 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 COX20Q5RI15 118 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 GRINAQ7Z429 371 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 QRSL1Q9H0R6 528 aaKnown RBP16.65■□□□□ 0.26
UBE3D-207ENST00000509102 SLC38A1Q9H2H9 487 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 COQ10BQ9H8M1 238 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 TPT1P8Q9HAU6 139 aa16.65■□□□□ 0.26
UBE3D-207ENST00000509102 YES1P07947 543 aa16.64■□□□□ 0.25
UBE3D-207ENST00000509102 CHRM4P08173 479 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms