RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 IL12BP29460 328 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 GABRA3P34903 492 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 CDKN2CP42773 168 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 CLK3P49761 638 aaKnown RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TNFSF10P50591 281 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 POU6F2P78424 691 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ARG2P78540 354 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 RBBP4Q09028 425 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 PLCXD2Q0VAA5 305 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 GAB1Q13480 694 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 HABP2Q14520 560 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 RGNQ15493 299 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 INAQ16352 499 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ZSWIM7Q19AV6 140 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ZNF630Q2M218 657 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 COL28A1Q2UY09 1125 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ZNF791Q3KP31 576 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ARHGAP11BQ3KRB8 267 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 LINC00303Q3SY05 128 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 LACTB2Q53H82 288 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC22A10Q63ZE4 541 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 B3GNTL1Q67FW5 361 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 HEPHL1Q6MZM0 1159 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ERICH5Q6P6B1 374 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 C16orf89Q6UX73 402 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 RTL4Q6ZR62 310 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 SZRD1Q7Z422 152 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 SERPINA11Q86U17 422 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 RNF130Q86XS8 419 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 MISPQ8IVT2 679 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC44A2Q8IWA5 706 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 BEST3Q8N1M1 668 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ARHGAP24Q8N264 748 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 FITM2Q8N6M3 262 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 SIRT6Q8N6T7 355 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 COX18Q8N8Q8 333 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TMEM178AQ8NBL3 297 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 FAM98AQ8NCA5 519 aaKnown RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC16A11Q8NCK7 471 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 CHDHQ8NE62 594 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TNIP2Q8NFZ5 429 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR10H5Q8NGA6 315 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 C9orf43Q8TAL5 461 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 CPT1CQ8TCG5 803 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 GPR151Q8TDV0 419 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC9A6Q92581 669 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TMCO6Q96DC7 493 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 OMA1Q96E52 524 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 COL21A1Q96P44 957 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TRNT1Q96Q11 434 aaKnown RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR7D2Q96RA2 312 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 GPATCH1Q9BRR8 931 aaKnown RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 INPP5KQ9BT40 448 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR51I1Q9H343 314 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TMPRSS5Q9H3S3 457 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 TMEM38AQ9H6F2 299 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 EVA1AQ9H8M9 152 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC25A37Q9NYZ2 338 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 VAPAQ9P0L0 249 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 LRFN1Q9P244 771 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 P2RX2Q9UBL9 471 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 ERVK-11Q9UQG0 969 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 KLF13Q9Y2Y9 288 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 EML6Q6ZMW3 1958 aa5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 PRRC2CQ9Y520 2896 aaKnown RBP5.02□□□□□ -1.61
HMGB1P44-201ENST00000508597 SVILO95425 2214 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 ITPR1Q14643 2758 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 A0A0G2JPF8 293 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 A0A1W2PQD3 144 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 CDHR4A6H8M9 788 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 CCT8L1PA6NM43 557 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 HNRNPCL2B2RXH8 293 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 HNRNPCL3B7ZW38 293 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 KLRC4-KLRK1H3BQV0 150 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 FXYD1O00168 92 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 HMGN4O00479 90 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 AIM2O14862 343 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 STX11O75558 287 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 REM1O75628 298 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 PDE9AO76083 593 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 KCNK2O95069 426 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 SCAF4O95104 1147 aaKnown RBP5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 UNC5CO95185 931 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 SNX4O95219 450 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 ABHD16AO95870 558 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 WDPCPO95876 746 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLPIP03973 132 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 P04436 131 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 HNRNPCL4P0DMR1 293 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 OR12D1P0DN82 309 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 ACP2P11117 423 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 CNR1P21554 472 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 SLC6A2P23975 617 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 PTGER1P34995 402 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 SOX3P41225 446 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 CRATP43155 626 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 MVDP53602 400 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 CRISP3P54108 245 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 DSTNP60981 165 aa5.01□□□□□ -1.61
HMGB1P44-201ENST00000508597 HPCAP84074 193 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms