RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ZNHIT1O43257 154 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 SEC14L5O43304 696 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 NTN1O95631 604 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 LDLRP01130 860 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 IL2RAP01589 272 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 CALB2P22676 271 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 AQP1P29972 269 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 SLC7A1P30825 629 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 RYKP34925 604 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 TIMP3P35625 211 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 SLC1A3P43003 542 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 IDH2P48735 452 aaKnown RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 CLK1P49759 484 aaKnown RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 POLR2HP52434 150 aaKnown RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 SLC7A2P52569 658 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 DLX5P56178 289 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 CLDN18P56856 261 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 SRYQ05066 204 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 MERTKQ12866 999 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 EPS8Q12929 822 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 SELPLGQ14242 412 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 HSPB2Q16082 182 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 SGCBQ16585 318 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 NDUFAF6Q330K2 333 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 EMC4Q5J8M3 183 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 RIPPLY2Q5TAB7 128 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 GTF2IRD2BQ6EKJ0 949 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 WBP2NLQ6ICG8 309 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 OR2A2Q6IF42 318 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 CLEC18BQ6UXF7 455 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 CCDC80Q76M96 950 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 OLIG3Q7RTU3 272 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 P4HA3Q7Z4N8 544 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 GTF2IRD2Q86UP8 949 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 CALHM3Q86XJ0 350 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 VRK2Q86Y07 508 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 PTOV1Q86YD1 416 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 ZZZ3Q8IYH5 903 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 PGAM4Q8N0Y7 254 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 LILRA2Q8N149 483 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 ARHGAP24Q8N264 748 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 ZNF808Q8N4W9 903 aaPredicted RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 CLEC18CQ8NCF0 446 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 OR10Q1Q8NGQ4 319 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 FBXO27Q8NI29 283 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 LZICQ8WZA0 190 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 SMPDL3BQ92485 455 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 CNOT9Q92600 299 aaKnown RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 PROX1Q92786 737 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 CPNE4Q96A23 557 aaPredicted RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 LRRC46Q96FV0 321 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 CCDC120Q96HB5 630 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 KLHL15Q96M94 604 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 UCN2Q96RP3 112 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 TRIB1Q96RU8 372 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 DMRTA2Q96SC8 542 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 KCTD14Q9BQ13 255 aaPredicted RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 GPATCH1Q9BRR8 931 aaKnown RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 TTYH2Q9BSA4 534 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 ALG2Q9H553 416 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 TNFRSF10DQ9UBN6 386 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 RPS6KB2Q9UBS0 482 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 TESQ9UGI8 421 aaKnown RBP8.25□□□□□ -1.09
NUP54-207ENST00000508583 CHRNA9Q9UGM1 479 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 SLC9A8Q9Y2E8 581 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 ZNF337Q9Y3M9 751 aa8.25□□□□□ -1.09
NUP54-207ENST00000508583 MBD3L4A6NDZ8 208 aaPredicted RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 MBD3L3A6NE82 208 aaPredicted RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 MBD3L5A6NJ08 208 aaPredicted RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 SLC22A20A6NK97 555 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 CLDN24A6NM45 220 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 B4DXG7 233 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 EIF1AYO14602 144 aaKnown RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 ADAMDEC1O15204 470 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 ZNF208O43345 1280 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 FMO6PO60774 539 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 SEMA7AO75326 666 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 MFN2O95140 757 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 SYNGR4O95473 234 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 PSMA4P25789 261 aaKnown RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 CHRNB4P30926 498 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 EIF1AXP47813 144 aaKnown RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 RNF144AP50876 292 aaPredicted RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 GZMMP51124 257 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 RGS8P57771 180 aaPredicted RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 PSME3P61289 254 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 CSNK2A1P68400 391 aaPredicted RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 LIPEQ05469 1076 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 PMPCAQ10713 525 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 SAMD4BQ5PRF9 694 aaKnown RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 DCST1Q5T197 706 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 HBMQ6B0K9 141 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 C8orf82Q6P1X6 216 aaPredicted RBP8.24□□□□□ -1.09
NUP54-207ENST00000508583 C3P1Q6ZMU1 363 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 PLEKHM3Q6ZWE6 761 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 TRPM8Q7Z2W7 1104 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 HMGN2P46Q86SG4 172 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 SLC15A3Q8IY34 581 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 UBQLNLQ8IYU4 475 aa8.24□□□□□ -1.09
NUP54-207ENST00000508583 MICU2Q8IYU8 434 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms