RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ARMC7Q9H6L4 198 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 TMEM185BQ9H7F4 350 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 MED4Q9NPJ6 270 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 SLC6A13Q9NSD5 602 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 GALNT8Q9NY28 637 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 PCDHB14Q9Y5E9 798 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 ANKHD1Q8IWZ3 2542 aaKnown RBP17.83■□□□□ 0.44
SFXN1-209ENST00000508290 DOCK7Q96N67 2140 aa17.83■□□□□ 0.44
SFXN1-209ENST00000508290 MED12Q93074 2177 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 A0A0J9YW62 118 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 CENPVL1A0A0U1RR11 272 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 A0A1W2PP18 115 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 ENO4A6NNW6 628 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 CLIC1O00299 241 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 NR5A2O00482 541 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 THBS1P07996 1170 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 CHRM4P08173 479 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 TFPTP0C1Z6 253 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 SFTPDP35247 375 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 CLK1P49759 484 aaKnown RBP17.82■□□□□ 0.44
SFXN1-209ENST00000508290 CTBP2P56545 445 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 SESN3P58005 492 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 DAZAP2Q15038 168 aaPredicted RBP17.82■□□□□ 0.44
SFXN1-209ENST00000508290 TOMM34Q15785 309 aaPredicted RBP17.82■□□□□ 0.44
SFXN1-209ENST00000508290 LIN52Q52LA3 116 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 GRINAQ7Z429 371 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 FUNDC1Q8IVP5 155 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 SLC43A2Q8N370 569 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 ZNF563Q8TA94 476 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 DACH2Q96NX9 599 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 NPAS1Q99742 590 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 NDRG3Q9UGV2 375 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 PROCRQ9UNN8 238 aa17.82■□□□□ 0.44
SFXN1-209ENST00000508290 A0A0G2JPF8 293 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 HNRNPCL2B2RXH8 293 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 HNRNPCL3B7ZW38 293 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 HNRNPCL1O60812 293 aaKnown RBP17.81■□□□□ 0.44
SFXN1-209ENST00000508290 SMNDC1O75940 238 aaKnown RBP eCLIP17.81■□□□□ 0.44
SFXN1-209ENST00000508290 AQP8O94778 261 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 HNRNPCL4P0DMR1 293 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 TROVE2P10155 538 aaKnown RBP eCLIP17.81■□□□□ 0.44
SFXN1-209ENST00000508290 EPXP11678 715 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 ETFAP13804 333 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 RNF144AP50876 292 aaPredicted RBP17.81■□□□□ 0.44
SFXN1-209ENST00000508290 RAC3P60763 192 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 LARS2Q15031 903 aaKnown RBP17.81■□□□□ 0.44
SFXN1-209ENST00000508290 RGNQ15493 299 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 ZNF239Q16600 458 aaKnown RBP17.81■□□□□ 0.44
SFXN1-209ENST00000508290 TMEM176BQ3YBM2 270 aaPredicted RBP17.81■□□□□ 0.44
SFXN1-209ENST00000508290 PPP4R4Q6NUP7 873 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 SLC2A7Q6PXP3 512 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 PLXDC2Q6UX71 529 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 PLEKHM3Q6ZWE6 761 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 RNF128Q8TEB7 428 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 SLC38A5Q8WUX1 472 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 KLHDC3Q9BQ90 382 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 BCL2L10Q9HD36 194 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 NPHS2Q9NP85 383 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 A4GALTQ9NPC4 353 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 ZNF446Q9NWS9 450 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 CRIM1Q9NZV1 1036 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 EDARQ9UNE0 448 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 ZNF232Q9UNY5 417 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 IFT52Q9Y366 437 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 CACNA1DQ01668 2161 aa17.81■□□□□ 0.44
SFXN1-209ENST00000508290 INTS1Q8N201 2190 aaKnown RBP17.81■□□□□ 0.44
SFXN1-209ENST00000508290 DNPH1O43598 174 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 BCHEP06276 602 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 HOXB9P17482 250 aaPredicted RBP17.8■□□□□ 0.44
SFXN1-209ENST00000508290 CSNK2A1P68400 391 aaPredicted RBP17.8■□□□□ 0.44
SFXN1-209ENST00000508290 MERTKQ12866 999 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 AGKQ53H12 422 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 RNF220Q5VTB9 566 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 VWA1Q6PCB0 445 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 OLIG3Q7RTU3 272 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 BTLAQ7Z6A9 289 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 STK32CQ86UX6 486 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 TMEM200AQ86VY9 491 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 ZZZ3Q8IYH5 903 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 SLC35B4Q969S0 331 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 ZG16BQ96DA0 208 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 PLSCR4Q9NRQ2 329 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 DNAJB12Q9NXW2 375 aaKnown RBP17.8■□□□□ 0.44
SFXN1-209ENST00000508290 DCTN4Q9UJW0 460 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 FBN2P35556 2912 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 LRBAP50851 2863 aa17.8■□□□□ 0.44
SFXN1-209ENST00000508290 KIAA1549Q9HCM3 1950 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 CFAP73A6NFT4 308 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 EVPLLA8MZ36 301 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 ATP8B1O43520 1251 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 EFNA2O43921 213 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 CTAG2O75638 210 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 CGAP01215 116 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 C1QCP02747 245 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 NCF2P19878 526 aaPredicted RBP17.79■□□□□ 0.44
SFXN1-209ENST00000508290 CPOXP36551 454 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 CD79BP40259 229 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 SIRPAP78324 504 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 GTDC1Q4AE62 458 aa17.79■□□□□ 0.44
SFXN1-209ENST00000508290 OR52P1PQ8NH57 321 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms