RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 HS6ST2Q96MM7 605 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 SNX18Q96RF0 628 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 TNFRSF13CQ96RJ3 184 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 RANGRFQ9HD47 186 aaPredicted RBP13.38□□□□□ -0.27
DDX41-208ENST00000507955 IGHV5-51A0A0C4DH38 117 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 A0A1B0GWA3 101 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 OR5K4A6NMS3 321 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 C12orf71A8MTZ7 269 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 B4DXG7 233 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 MAGEB4O15481 346 aaPredicted RBP13.38□□□□□ -0.27
DDX41-208ENST00000507955 KIR2DL3P43628 341 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 Q5BKY6 102 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 VASNQ6EMK4 673 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 CLDN22Q8N7P3 220 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 TSTD1Q8NFU3 115 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 OR51L1Q8NGJ5 315 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 OR4C3Q8NH37 302 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 STACQ99469 402 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 TNFRSF10DQ9UBN6 386 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 MALT1Q9UDY8 824 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 SATB2Q9UPW6 733 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 ERVK-19Q9WJR5 959 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 CLDN16Q9Y5I7 305 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 UNC13CQ8NB66 2214 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 SNTNA6NMZ2 147 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 IMPA2O14732 288 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 NKX2-2O95096 273 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 PPP1R3DO95685 299 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 BMP7P18075 431 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 CCR5P51681 352 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 SCN1BQ07699 218 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 TPBGQ13641 420 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 XKRXQ6PP77 449 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 ZNF321PQ8N8H1 164 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 GALNT6Q8NCL4 622 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 LILRB4Q8NHJ6 448 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 NR4A3Q92570 626 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 RFKQ969G6 155 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 KCTD7Q96MP8 289 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 TIMP4Q99727 224 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 SPRTNQ9H040 489 aaPredicted RBP13.37□□□□□ -0.27
DDX41-208ENST00000507955 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
DDX41-208ENST00000507955 CCDC86Q9H6F5 360 aaKnown RBP13.37□□□□□ -0.27
DDX41-208ENST00000507955 COMMD3Q9UBI1 195 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 SIGLEC7Q9Y286 467 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 IGHV1OR15-9A0A0B4J2B8 117 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 FAM172BPA6NC97 362 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 HMX3A6NHT5 357 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 POLR1CO15160 346 aaPredicted RBP13.37□□□□□ -0.27
DDX41-208ENST00000507955 GMFGO60234 142 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 TMCC2O75069 709 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 HTR1FP30939 366 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 ACAA2P42765 397 aaKnown RBP13.37□□□□□ -0.27
DDX41-208ENST00000507955 MRPS15P82914 257 aaKnown RBP13.37□□□□□ -0.27
DDX41-208ENST00000507955 FOXK2Q01167 660 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 AMZ1Q400G9 498 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 QSOX2Q6ZRP7 698 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 VASH1Q7L8A9 365 aaPredicted RBP13.37□□□□□ -0.27
DDX41-208ENST00000507955 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 SLC37A3Q8NCC5 494 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 SLC7A6Q92536 515 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 DNAJA3Q96EY1 480 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 GPR27Q9NS67 375 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 SOHLH2Q9NX45 425 aa13.37□□□□□ -0.27
DDX41-208ENST00000507955 EXOSC1Q9Y3B2 195 aaKnown RBP13.37□□□□□ -0.27
DDX41-208ENST00000507955 ANKRD34BA5PLL1 514 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 FAM221BA6H8Z2 402 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 A8MUA0 341 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 E9PI62 339 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 SLC30A4O14863 429 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 SEC14L5O43304 696 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 IFNA16P05015 189 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 APEX1P27695 318 aaKnown RBP13.36□□□□□ -0.27
DDX41-208ENST00000507955 CDK10Q15131 360 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 RPTNQ6XPR3 784 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 RDH10Q8IZV5 341 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 RFLNBQ8N5W9 214 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 DTX3Q8N9I9 347 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 ATP6V1C2Q8NEY4 427 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 OR10H4Q8NGA5 316 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 SLC38A3Q99624 504 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 PRRG3Q9BZD7 231 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 FOXQ1Q9C009 403 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 SLC22A4Q9H015 551 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 PAQR5Q9NXK6 330 aaPredicted RBP13.36□□□□□ -0.27
DDX41-208ENST00000507955 DNAJB12Q9NXW2 375 aaKnown RBP13.36□□□□□ -0.27
DDX41-208ENST00000507955 MED31Q9Y3C7 131 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 STK25O00506 426 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 DRD5P21918 477 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 CRYZQ08257 329 aaKnown RBP13.36□□□□□ -0.27
DDX41-208ENST00000507955 PRTGQ2VWP7 1150 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 PYDC2Q56P42 97 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 ALG10BQ5I7T1 473 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 MANEAQ5SRI9 462 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 FAM27D1Q5T7N8 215 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 NIPAL3Q6P499 406 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 OR52L1Q8NGH7 329 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 C16orf52Q8NHV5 167 aa13.36□□□□□ -0.27
DDX41-208ENST00000507955 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.36□□□□□ -0.27
DDX41-208ENST00000507955 RELTQ969Z4 430 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms