RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 AQP12AQ8IXF9 295 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 C10orf67Q8IYJ2 551 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 CADM2Q8N3J6 435 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 ZNF843Q8N446 348 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 GPR32P1Q8NGA4 272 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 MCHR1Q99705 422 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 C12orf10Q9HB07 376 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 ACAD8Q9UKU7 415 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 CHST2Q9Y4C5 530 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 EML6Q6ZMW3 1958 aa18.19■□□□□ 0.5
USP53-203ENST00000507597 OR2M5A3KFT3 312 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 ETV2O00321 342 aaPredicted RBP18.18■□□□□ 0.5
USP53-203ENST00000507597 UMPSP11172 480 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 ABOP16442 354 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 CXCR1P25024 350 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 TDGF1P3P51864 188 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 DLX5P56178 289 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 RAC1P63000 192 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 MERTKQ12866 999 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 SELENBP1Q13228 472 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 ZNF613Q6PF04 617 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 ULK3Q6PHR2 472 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 CYP2R1Q6VVX0 501 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 VANGL1Q8TAA9 524 aaPredicted RBP18.18■□□□□ 0.5
USP53-203ENST00000507597 SLC25A43Q8WUT9 341 aaPredicted RBP18.18■□□□□ 0.5
USP53-203ENST00000507597 SLC47A1Q96FL8 570 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 HSH2DQ96JZ2 352 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 SLC6A15Q9H2J7 730 aa18.18■□□□□ 0.5
USP53-203ENST00000507597 A0A1B0GTH9 108 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 C17orf51A8MQB3 221 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 M0R3H8 397 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 PRRG2O14669 202 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 PNMTP11086 282 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 POU3F2P20265 443 aaPredicted RBP18.17■□□□□ 0.5
USP53-203ENST00000507597 CLK1P49759 484 aaKnown RBP18.17■□□□□ 0.5
USP53-203ENST00000507597 CRYBA2P53672 197 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 GFRA1P56159 465 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 FOXF1Q12946 379 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 FAM98BQ52LJ0 330 aaKnown RBP18.17■□□□□ 0.5
USP53-203ENST00000507597 PRR30Q53SZ7 412 aaPredicted RBP18.17■□□□□ 0.5
USP53-203ENST00000507597 SWT1Q5T5J6 900 aaKnown RBP18.17■□□□□ 0.5
USP53-203ENST00000507597 C3orf33Q6P1S2 294 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 PLEKHM3Q6ZWE6 761 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 CHMP1BQ7LBR1 199 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 MEIOBQ8N635 442 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 PAQR5Q9NXK6 330 aaPredicted RBP18.17■□□□□ 0.5
USP53-203ENST00000507597 SLC7A8Q9UHI5 535 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 POMPQ9Y244 141 aa18.17■□□□□ 0.5
USP53-203ENST00000507597 TLN1Q9Y490 2541 aaKnown RBP18.17■□□□□ 0.5
USP53-203ENST00000507597 SPTA1P02549 2419 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 FRS3O43559 492 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 BCAS1O75363 584 aaPredicted RBP18.16■□□□□ 0.5
USP53-203ENST00000507597 PRKD3O94806 890 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 HOXD4P09016 255 aaPredicted RBP18.16■□□□□ 0.5
USP53-203ENST00000507597 CELA3AP09093 270 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 TCEA1P23193 301 aaKnown RBP18.16■□□□□ 0.5
USP53-203ENST00000507597 ZNF136P52737 540 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 TAS2R41P59536 307 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 RPS3AP61247 264 aaKnown RBP18.16■□□□□ 0.5
USP53-203ENST00000507597 MS4A2Q01362 244 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 CHRNB3Q05901 458 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 OR1Q1Q15612 314 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 TOMM34Q15785 309 aaPredicted RBP18.16■□□□□ 0.5
USP53-203ENST00000507597 TMEM44Q2T9K0 475 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 C1orf146Q5VVC0 180 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 VASNQ6EMK4 673 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 GALNT11Q8NCW6 608 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 OR6T1Q8NGN1 323 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 RNF217Q8TC41 542 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 DDIT4LQ96D03 193 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 ADAM19Q9H013 955 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 MAGIXQ9H6Y5 334 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 YY1AP1Q9H869 796 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 SLC6A5Q9Y345 797 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 HRH3Q9Y5N1 445 aa18.16■□□□□ 0.5
USP53-203ENST00000507597 FAM208BQ5VWN6 2430 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 NBEAQ8NFP9 2946 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 TRAPPC13A5PLN9 417 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 H3BML4 177 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 ACOT8O14734 319 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 EPPINO95925 133 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 PRB1P04280 392 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 THRBP10828 461 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 PRG2P13727 222 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 GABRA1P14867 456 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 BMP7P18075 431 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 PSMA4P25789 261 aaKnown RBP18.15■□□□□ 0.5
USP53-203ENST00000507597 TACR3P29371 465 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 PTGER4P35408 488 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 OR1E2P47887 323 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 PLAURQ03405 335 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 TLE1Q04724 770 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 ALG10BQ5I7T1 473 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 ENTPD8Q5MY95 495 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 C5orf46Q6UWT4 87 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 DEF8Q6ZN54 512 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 VTCN1Q7Z7D3 282 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 SPATA24Q86W54 205 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 TIGARQ9NQ88 270 aa18.15■□□□□ 0.5
USP53-203ENST00000507597 CHRNA9Q9UGM1 479 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms