RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ROPN1LQ96C74 230 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 ZG16BQ96DA0 208 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 SLC35A5Q9BS91 424 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 INPP5KQ9BT40 448 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 PRRG4Q9BZD6 226 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 GP6Q9HCN6 339 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 ACER3Q9NUN7 267 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 KLHL28Q9NXS3 571 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 NKIRAS1Q9NYS0 192 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 EDARQ9UNE0 448 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 WDR45Q9Y484 360 aa8.1□□□□□ -1.11
PDLIM5-209ENST00000506632 ROS1P08922 2347 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 FLNAP21333 2647 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 CCDC154A6NI56 674 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 GJE1A6NN92 205 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 CASKO14936 926 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 H6PDO95479 791 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 PLGP00747 810 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 THBDP07204 575 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 PABPC4LP0CB38 370 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 UBTFL6P0CB48 400 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 KITP10721 976 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 IDO1P14902 403 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 CD53P19397 219 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 PGCP20142 388 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 CHI3L1P36222 383 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 KCNJ5P48544 419 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 MVDP53602 400 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 NME5P56597 212 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 SESN3P58005 492 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 RAC3P60763 192 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 LRRC74AQ0VAA2 488 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 RNPS1Q15287 305 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 POU4F3Q15319 338 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 TIGD2Q4W5G0 525 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 SLC9B1Q4ZJI4 515 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 AGBL2Q5U5Z8 902 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 GTF2IRD2BQ6EKJ0 949 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 PPP4R4Q6NUP7 873 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 C3orf33Q6P1S2 294 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 EIF3MQ7L2H7 374 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF550Q7Z398 422 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 GTF2IRD2Q86UP8 949 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 RNF130Q86XS8 419 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 TMCO5AQ8N6Q1 288 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 TRIML2Q8N7C3 387 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 RFWD2Q8NHY2 731 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 PIWIL2Q8TC59 973 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 ABHD3Q8WU67 409 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 ROBO4Q8WZ75 1007 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 TRNT1Q96Q11 434 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 OR52E6Q96RD3 313 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 PANX1Q96RD7 426 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 MED18Q9BUE0 208 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 THUMPD3Q9BV44 507 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 OR10A4Q9H209 315 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 SLC38A1Q9H2H9 487 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 TIGARQ9NQ88 270 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 EXOSC3Q9NQT5 275 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 SDR39U1Q9NRG7 319 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 SLC6A13Q9NSD5 602 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 ZNF226Q9NYT6 803 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 ZIM2Q9NZV7 527 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 ING1Q9UK53 422 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 SLC35A3Q9Y2D2 325 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 FREM1Q5H8C1 2179 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 PRR14LQ5THK1 2151 aa8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 MAP1AP78559 2803 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 RAI1Q7Z5J4 1906 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-209ENST00000506632 AGAP5A6NIR3 686 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 ADAM11O75078 769 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 GCM2O75603 506 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 SLC22A3O75751 556 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 IL6P05231 212 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 CHRM4P08173 479 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 ZCCHC18P0CG32 403 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 PPP3CBP16298 524 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 PSMB1P20618 241 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 RPS4Y1P22090 263 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 ENPP1P22413 925 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 MAGEA8P43361 318 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 MRPL19P49406 292 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 CCR4P51679 360 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 KCNJ10P78508 379 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 CHRNEQ04844 493 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 MAPK11Q15759 364 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 SYPL1Q16563 259 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 GSTA3Q16772 222 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 DEFB113Q30KQ7 82 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 COX20Q5RI15 118 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 FBXW10Q5XX13 1052 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 TFAP2EQ6VUC0 442 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 LRRC74BQ6ZQY2 392 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 MSANTD1Q6ZTZ1 278 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 BEND4Q6ZU67 534 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 PLEKHM3Q6ZWE6 761 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 FCRLAQ7L513 359 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 NUFIP2Q7Z417 695 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 TGIF2LYQ8IUE0 185 aa8.08□□□□□ -1.12
PDLIM5-209ENST00000506632 GABRG1Q8N1C3 465 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms