RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 LIN52Q52LA3 116 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 GCNT6Q5T4J0 391 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 MRPL2Q5T653 305 aaKnown RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 GGNQ86UU5 652 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 METTL25Q8N6Q8 603 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 RELL2Q8NC24 303 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 FAM71CQ8NEG0 241 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 ATP6V1C2Q8NEY4 427 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 ZNF563Q8TA94 476 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 TSPEARQ8WU66 669 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 NINJ1Q92982 152 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 WNT2BQ93097 391 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 MAL2Q969L2 176 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 ZNF845Q96IR2 970 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 TM9SF2Q99805 663 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 CPPED1Q9BRF8 314 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 CXXC4Q9H2H0 198 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 IKZF5Q9H5V7 419 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 MTHFD2LQ9H903 347 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-209ENST00000506630 A4GALTQ9NPC4 353 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 SAR1AQ9NR31 198 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 DSPPQ9NZW4 1301 aa11.79□□□□□ -0.52
TCOF1-209ENST00000506630 A0A0G2JPF8 293 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 HNRNPCL2B2RXH8 293 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 HNRNPCL3B7ZW38 293 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 TNFSF11O14788 317 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 HNRNPCL1O60812 293 aaKnown RBP11.78□□□□□ -0.52
TCOF1-209ENST00000506630 TGM6O95932 706 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 HNRNPCL4P0DMR1 293 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 BMP2P12643 396 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 NID1P14543 1247 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 CTSSP25774 331 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 ADH6P28332 368 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 RYKP34925 604 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 MTPNP58546 118 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 PLAURQ03405 335 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 TFF3Q07654 80 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 KLF10Q13118 480 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 SELENBP1Q13228 472 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 PON3Q15166 354 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 MAPRE2Q15555 327 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 MMEL1Q495T6 779 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 RUNDC3AQ59EK9 446 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 AP1ARQ63HQ0 302 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 POMZP3Q6PJE2 187 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 DLEU7Q6UYE1 221 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 ZNF836Q6ZNA1 936 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 VRK2Q86Y07 508 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 CMIPQ8IY22 773 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 GCNT2Q8N0V5 402 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 LILRA2Q8N149 483 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 C10orf111Q8N326 155 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 DPP10Q8N608 796 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 OR52P1PQ8NH57 321 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 OR10D3Q8NH80 312 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 OR2V1Q8NHB1 315 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 NFKBIDQ8NI38 313 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 TMEM234Q8WY98 164 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 ST8SIA1Q92185 356 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 FIG4Q92562 907 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 CNOT9Q92600 299 aaKnown RBP11.78□□□□□ -0.52
TCOF1-209ENST00000506630 NRGNQ92686 78 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 PMM1Q92871 262 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 ZNF524Q96C55 264 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 INTS12Q96CB8 462 aaKnown RBP11.78□□□□□ -0.52
TCOF1-209ENST00000506630 MRGPRX4Q96LA9 322 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 ZFP3Q96NJ6 502 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 UCN2Q96RP3 112 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 CGREF1Q99674 301 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 FAM107BQ9H098 131 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 NSRP1Q9H0G5 558 aaKnown RBP11.78□□□□□ -0.52
TCOF1-209ENST00000506630 EXOSC3Q9NQT5 275 aaKnown RBP11.78□□□□□ -0.52
TCOF1-209ENST00000506630 CCM2LQ9NUG4 571 aaPredicted RBP11.78□□□□□ -0.52
TCOF1-209ENST00000506630 DNAJB12Q9NXW2 375 aaKnown RBP11.78□□□□□ -0.52
TCOF1-209ENST00000506630 EDARQ9UNE0 448 aa11.78□□□□□ -0.52
TCOF1-209ENST00000506630 ZNF443Q9Y2A4 671 aaPredicted RBP11.78□□□□□ -0.52
TCOF1-209ENST00000506630 ANKHD1Q8IWZ3 2542 aaKnown RBP11.78□□□□□ -0.52
TCOF1-209ENST00000506630 GJE1A6NN92 205 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 EEF1E1-BLOC1S5C9J1V9 151 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 EEF1E1O43324 174 aaKnown RBP11.77□□□□□ -0.53
TCOF1-209ENST00000506630 RCBTB2O95199 551 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 ARAFP10398 606 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 SHC1P29353 583 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 SLC6A8P48029 635 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 GYS2P54840 703 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 MERTKQ12866 999 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 FOXF2Q12947 444 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 LARS2Q15031 903 aaKnown RBP11.77□□□□□ -0.53
TCOF1-209ENST00000506630 CTU2Q2VPK5 515 aaKnown RBP11.77□□□□□ -0.53
TCOF1-209ENST00000506630 SLC25A53Q5H9E4 307 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 PDSS1Q5T2R2 415 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 PRAMEF8Q5VWM4 474 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 PRAMEF7Q5VXH5 474 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 HBMQ6B0K9 141 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 REP15Q6BDI9 236 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 ESPNLQ6ZVH7 1005 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 BBS10Q8TAM1 723 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 FNDC9Q8TBE3 224 aa11.77□□□□□ -0.53
TCOF1-209ENST00000506630 ADGRG7Q96K78 797 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms