RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 PCYOX1LQ8NBM8 494 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 OR10D3Q8NH80 312 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 SLC25A43Q8WUT9 341 aaPredicted RBP15.01□□□□□ -0.01
SNCA-209ENST00000506244 MAL2Q969L2 176 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 ADGRG7Q96K78 797 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 KLHDC3Q9BQ90 382 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 SLC24A3Q9HC58 644 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 DOCK7Q96N67 2140 aa15.01□□□□□ -0.01
SNCA-209ENST00000506244 CDHR4A6H8M9 788 aa15□□□□□ -0.01
SNCA-209ENST00000506244 CFAP73A6NFT4 308 aa15□□□□□ -0.01
SNCA-209ENST00000506244 CLDN24A6NM45 220 aa15□□□□□ -0.01
SNCA-209ENST00000506244 H0YC42 278 aa15□□□□□ -0.01
SNCA-209ENST00000506244 FAAHO00519 579 aa15□□□□□ -0.01
SNCA-209ENST00000506244 MRASO14807 208 aa15□□□□□ -0.01
SNCA-209ENST00000506244 PGM3O95394 542 aa15□□□□□ -0.01
SNCA-209ENST00000506244 CD1EP15812 388 aa15□□□□□ -0.01
SNCA-209ENST00000506244 FKBP2P26885 142 aaKnown RBP15□□□□□ -0.01
SNCA-209ENST00000506244 COL8A1P27658 744 aa15□□□□□ -0.01
SNCA-209ENST00000506244 GRNP28799 593 aaKnown RBP15□□□□□ -0.01
SNCA-209ENST00000506244 RYKP34925 604 aa15□□□□□ -0.01
SNCA-209ENST00000506244 SFTPDP35247 375 aa15□□□□□ -0.01
SNCA-209ENST00000506244 PEX19P40855 299 aa15□□□□□ -0.01
SNCA-209ENST00000506244 APOBEC1P41238 236 aaKnown RBP15□□□□□ -0.01
SNCA-209ENST00000506244 TPD52P55327 224 aaPredicted RBP15□□□□□ -0.01
SNCA-209ENST00000506244 DLX5P56178 289 aa15□□□□□ -0.01
SNCA-209ENST00000506244 SESN3P58005 492 aa15□□□□□ -0.01
SNCA-209ENST00000506244 TFF3Q07654 80 aa15□□□□□ -0.01
SNCA-209ENST00000506244 RBBP4Q09028 425 aa15□□□□□ -0.01
SNCA-209ENST00000506244 MERTKQ12866 999 aa15□□□□□ -0.01
SNCA-209ENST00000506244 SCARB2Q14108 478 aa15□□□□□ -0.01
SNCA-209ENST00000506244 CTU2Q2VPK5 515 aaKnown RBP15□□□□□ -0.01
SNCA-209ENST00000506244 REP15Q6BDI9 236 aa15□□□□□ -0.01
SNCA-209ENST00000506244 SP5Q6BEB4 398 aaPredicted RBP15□□□□□ -0.01
SNCA-209ENST00000506244 PPP4R4Q6NUP7 873 aa15□□□□□ -0.01
SNCA-209ENST00000506244 ZNF836Q6ZNA1 936 aa15□□□□□ -0.01
SNCA-209ENST00000506244 GRINAQ7Z429 371 aa15□□□□□ -0.01
SNCA-209ENST00000506244 SNX32Q86XE0 403 aa15□□□□□ -0.01
SNCA-209ENST00000506244 SLC30A8Q8IWU4 369 aa15□□□□□ -0.01
SNCA-209ENST00000506244 C11orf65Q8NCR3 313 aa15□□□□□ -0.01
SNCA-209ENST00000506244 HIPK4Q8NE63 616 aa15□□□□□ -0.01
SNCA-209ENST00000506244 NFKBIDQ8NI38 313 aa15□□□□□ -0.01
SNCA-209ENST00000506244 CNOT9Q92600 299 aaKnown RBP15□□□□□ -0.01
SNCA-209ENST00000506244 SLC35B4Q969S0 331 aa15□□□□□ -0.01
SNCA-209ENST00000506244 CPNE4Q96A23 557 aaPredicted RBP15□□□□□ -0.01
SNCA-209ENST00000506244 ZNF607Q96SK3 696 aa15□□□□□ -0.01
SNCA-209ENST00000506244 NPAS1Q99742 590 aa15□□□□□ -0.01
SNCA-209ENST00000506244 SPATA9Q9BWV2 254 aa15□□□□□ -0.01
SNCA-209ENST00000506244 PRRG4Q9BZD6 226 aa15□□□□□ -0.01
SNCA-209ENST00000506244 UCK2Q9BZX2 261 aa15□□□□□ -0.01
SNCA-209ENST00000506244 PIGMQ9H3S5 423 aa15□□□□□ -0.01
SNCA-209ENST00000506244 IKZF5Q9H5V7 419 aa15□□□□□ -0.01
SNCA-209ENST00000506244 FOXD3Q9UJU5 478 aaPredicted RBP15□□□□□ -0.01
SNCA-209ENST00000506244 SETXQ7Z333 2677 aaKnown RBP15□□□□□ -0.01
SNCA-209ENST00000506244 PRORSD1PA6NEY8 169 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 EEF1E1-BLOC1S5C9J1V9 151 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 TNFSF11O14788 317 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 EEF1E1O43324 174 aaKnown RBP14.99□□□□□ -0.01
SNCA-209ENST00000506244 BCAS1O75363 584 aaPredicted RBP14.99□□□□□ -0.01
SNCA-209ENST00000506244 TGM6O95932 706 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 PABPC4LP0CB38 370 aaKnown RBP14.99□□□□□ -0.01
SNCA-209ENST00000506244 MTPNP58546 118 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 COPZ1P61923 177 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 ZNF311Q5JNZ3 666 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 PLEKHM3Q6ZWE6 761 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 ZNF550Q7Z398 422 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 CPLX4Q7Z7G2 160 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 VRK2Q86Y07 508 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 LIX1LQ8IVB5 337 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 GCNT2Q8N0V5 402 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 RELL2Q8NC24 303 aaPredicted RBP14.99□□□□□ -0.01
SNCA-209ENST00000506244 BHLHE22Q8NFJ8 381 aaPredicted RBP14.99□□□□□ -0.01
SNCA-209ENST00000506244 OR8J3Q8NGG0 315 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 FNDC9Q8TBE3 224 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 FIG4Q92562 907 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 INTS12Q96CB8 462 aaKnown RBP14.99□□□□□ -0.01
SNCA-209ENST00000506244 REXO5Q96IC2 774 aaKnown RBP14.99□□□□□ -0.01
SNCA-209ENST00000506244 ZNF845Q96IR2 970 aaPredicted RBP14.99□□□□□ -0.01
SNCA-209ENST00000506244 SPOCK3Q9BQ16 436 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 FAM107BQ9H098 131 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 RNF122Q9H9V4 155 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 GID8Q9NWU2 228 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 PACSIN3Q9UKS6 424 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 HEATR5AQ86XA9 2040 aa14.99□□□□□ -0.01
SNCA-209ENST00000506244 KIAA1549Q9HCM3 1950 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 GMNCA6NCL1 334 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 FBP2O00757 339 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 CXCL13O43927 109 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 SERPINB7O75635 380 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 PLGP00747 810 aaPredicted RBP14.98□□□□□ -0.01
SNCA-209ENST00000506244 IL11P20809 199 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 PRKAR1BP31321 381 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 IDH2P48735 452 aaKnown RBP14.98□□□□□ -0.01
SNCA-209ENST00000506244 MAP2K6P52564 334 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 CARD18P57730 90 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 GNGT1P63211 74 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 PLAURQ03405 335 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 EPS8Q12929 822 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 TMEM176BQ3YBM2 270 aaPredicted RBP14.98□□□□□ -0.01
SNCA-209ENST00000506244 FBXL19-AS1Q494R0 122 aa14.98□□□□□ -0.01
SNCA-209ENST00000506244 HIST2H2BCQ6DN03 193 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms