RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZNF716A6NP11 495 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 E5RI56 91 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 F5H0A9 414 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 POC1B-GALNT4F8VUJ3 575 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 H3BMM5 538 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 M0R233 179 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 KIF2AO00139 706 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 TMPRSS11DO60235 418 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CDC14BO60729 498 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 NDUFS3O75489 264 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 FOXH1O75593 365 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 IL33O95760 270 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 IGKV3-15P01624 115 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 KRT14P02533 472 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CHRM2P08172 466 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 OGNP20774 298 aaKnown RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ADRA1DP25100 572 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 GSTM2P28161 218 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 SFTPDP35247 375 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ETV4P43268 484 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CRYBB2P43320 205 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ASMTP46597 345 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 SLC6A9P48067 706 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 EVX1P49640 407 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 TERF1P54274 439 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 PNLIPRP2P54317 469 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 SLC35A2P78381 396 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 EMX1Q04741 257 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF763Q0D2J5 394 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CALCOCO2Q13137 446 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 STX5Q13190 355 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 THOC5Q13769 683 aaKnown RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 SLBPQ14493 270 aaKnown RBP eCLIP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 SLMAPQ14BN4 828 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 TRIP13Q15645 432 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CCNG2Q16589 344 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 C3orf36Q3SXR2 165 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 TTLL9Q3SXZ7 439 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 C1QTNF12Q5T7M4 302 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 C9orf135Q5VTT2 229 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ARMC3Q5W041 872 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 MRNIPQ6NTE8 343 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CCDC137Q6PK04 289 aaKnown RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 FRRS1Q6ZNA5 592 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF771Q7L3S4 317 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 LRP11Q86VZ4 500 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 MUC20Q8N307 709 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 SLC43A2Q8N370 569 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 GALNT4Q8N4A0 578 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 GPATCH11Q8N954 259 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 OR4F15Q8NGB8 312 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 OR4N2Q8NGD1 307 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 PPP1R35Q8TAP8 253 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CALML6Q8TD86 181 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ACTRT1Q8TDG2 376 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 DUSP19Q8WTR2 217 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ANKRD7Q92527 254 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 RAB8BQ92930 207 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 MAGOHBQ96A72 148 aaKnown RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF669Q96BR6 464 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 EFHD2Q96C19 240 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ZG16BQ96DA0 208 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 RCC1LQ96I51 464 aaKnown RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 VSTM2LQ96N03 204 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 KCNC2Q96PR1 638 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 OSBPL9Q96SU4 736 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CITED2Q99967 270 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 MRI1Q9BV20 369 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 MS4A8Q9BY19 250 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 KRTAP9-2Q9BYQ4 174 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CD244Q9BZW8 370 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 NELFAQ9H3P2 528 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CENPHQ9H3R5 247 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ZNF385DQ9H6B1 395 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 NT5DC2Q9H857 520 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 COPS7BQ9H9Q2 264 aaPredicted RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ETNK1Q9HBU6 452 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 CHRAC1Q9NRG0 131 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 INPP5EQ9NRR6 644 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 IARS2Q9NSE4 1012 aaKnown RBP2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ASB6Q9NWX5 421 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 MAT2BQ9NZL9 334 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 KLHL9Q9P2J3 617 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 RNF14Q9UBS8 474 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 DCTN4Q9UJW0 460 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 SLC22A14Q9Y267 594 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ASB4Q9Y574 426 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 ACTL7BQ9Y614 415 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 MAD1L1Q9Y6D9 718 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 COMMD10Q9Y6G5 202 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 TNCP24821 2201 aa2.78□□□□□ -1.96
TCOF1-208ENST00000506063 FLG2Q5D862 2391 aaPredicted RBP2.78□□□□□ -1.97
TCOF1-208ENST00000506063 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.97
TCOF1-208ENST00000506063 LRP1BQ9NZR2 4599 aa2.77□□□□□ -1.97
TCOF1-208ENST00000506063 IGHV2OR16-5A0A0B4J2B6 119 aa2.77□□□□□ -1.97
TCOF1-208ENST00000506063 A0A1B0GW55 424 aa2.77□□□□□ -1.97
TCOF1-208ENST00000506063 A0A1W2PRB8 838 aa2.77□□□□□ -1.97
TCOF1-208ENST00000506063 TCRBV7S2A1N4TA0A589 114 aa2.77□□□□□ -1.97
TCOF1-208ENST00000506063 ZNF503-AS2A6NEH8 195 aa2.77□□□□□ -1.97
TCOF1-208ENST00000506063 GOLGA8KD6RF30 607 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms