RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CLK3P49761 638 aaKnown RBP7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 POU4F3Q15319 338 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 CD300LDQ6UXZ3 194 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 BAG5Q9UL15 447 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 TRAPPC4Q9Y296 219 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 NINQ8N4C6 2090 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 A0A1W2PNV4 684 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 CFAP73A6NFT4 308 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 CD8B2A6NJW9 211 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 IFNA14P01570 189 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 IGHMP01871 453 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 HOXD4P09016 255 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 KRT20P35900 424 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 AGFG1P52594 562 aaKnown RBP7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC16A1P53985 500 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 RAC1P63000 192 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 RAPSNQ13702 412 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 LY6DQ14210 128 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 GPR68Q15743 365 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 ENPP6Q6UWR7 440 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 SPPL2CQ8IUH8 684 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 DUSP19Q8WTR2 217 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 CLPTM1LQ96KA5 538 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 METTL7AQ9H8H3 244 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 CALHM2Q9HA72 323 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 ANKRD10Q9NXR5 420 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 MBD3L4A6NDZ8 208 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 MBD3L3A6NE82 208 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 MBD3L5A6NJ08 208 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF133P52736 654 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 NDUFAF6Q330K2 333 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 FAM13CQ8NE31 585 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 MBD3L2Q8NHZ7 208 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 FAM57AQ8TBR7 257 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 UGT2B28Q9BY64 529 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 DSN1Q9H410 356 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 NTN4Q9HB63 628 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 PPP4R1LQ9P1A2 415 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 ENPP4Q9Y6X5 453 aa7.47□□□□□ -1.21
CDC42SE2-208ENST00000505065 SERPINA1P01009 418 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 CSTAP01040 98 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 POLR2HP52434 150 aaKnown RBP7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 PPIAP62937 165 aaKnown RBP7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 SELENBP1Q13228 472 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 PRR30Q53SZ7 412 aaPredicted RBP7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC46A3Q7Z3Q1 461 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC25A43Q8WUT9 341 aaPredicted RBP7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC39A7Q92504 469 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 HSH2DQ96JZ2 352 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 GNRHR2Q96P88 292 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF300Q96RE9 604 aaPredicted RBP7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 TRIM2Q9C040 744 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 RLIMQ9NVW2 624 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 CARD8Q9Y2G2 431 aa7.46□□□□□ -1.21
CDC42SE2-208ENST00000505065 URB1O60287 2271 aaKnown RBP7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 TMEM72A0PK05 275 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 EBAG9O00559 213 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 BCKDKO14874 412 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 GYG2O15488 501 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 BGLAPP02818 100 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 TP53P04637 393 aaPredicted RBP7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 BMP7P18075 431 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 RHCEP18577 417 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 PGCP20142 388 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 IL11P20809 199 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 FUT4P22083 530 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 CEACAM8P31997 349 aaPredicted RBP7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 VLDLRP98155 873 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 PMP22Q01453 160 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZP4Q12836 540 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 QPRTQ15274 297 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 LRRC75AQ8NAA5 344 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 FAM98AQ8NCA5 519 aaKnown RBP7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 TIMP4Q99727 224 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 TBL1XR1Q9BZK7 514 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 TRIM15Q9C019 465 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 MED11Q9P086 117 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 OR2M5A3KFT3 312 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 PTGER4P35408 488 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 FOXF1Q12946 379 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 PRAMEF20Q5VT98 475 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 MARVELD2Q8N4S9 558 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 DNAJA4Q8WW22 397 aaPredicted RBP7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 PIGQQ9BRB3 760 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 ZNF175Q9Y473 711 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 FAM215AQ9Y5M1 114 aa7.46□□□□□ -1.22
CDC42SE2-208ENST00000505065 H3BNH8 94 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 NQO1P15559 274 aaKnown RBP7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 PRKCDQ05655 676 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 OR1Q1Q15612 314 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 IFI44LQ53G44 452 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 GDF7Q7Z4P5 450 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 RBM45Q8IUH3 476 aaKnown RBP7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 EPYCQ99645 322 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 KLRF1Q9NZS2 232 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 KLHL13Q9P2N7 655 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 OSGIN1Q9UJX0 560 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 ASAH2BP0C7U1 165 aa7.45□□□□□ -1.22
CDC42SE2-208ENST00000505065 PNMTP11086 282 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms