RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 LAT2Q9GZY6 243 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 SAP130Q9H0E3 1048 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 C12orf49Q9H741 205 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CXorf36Q9H7Y0 433 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 EML4Q9HC35 981 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 TNFRSF12AQ9NP84 129 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 EQTNQ9NQ60 294 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 EXOSC3Q9NQT5 275 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 POLE3Q9NRF9 147 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CBLN4Q9NTU7 201 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 ZCCHC3Q9NUD5 404 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CISD1Q9NZ45 108 aaKnown RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 EMC3Q9P0I2 261 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 LPAR3Q9UBY5 353 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 MALT1Q9UDY8 824 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 FBXO9Q9UK97 447 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CDC42EP3Q9UKI2 254 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 CLEC4AQ9UMR7 237 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 FAF1Q9UNN5 650 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 TRAPPC4Q9Y296 219 aa5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 SPIN1Q9Y657 262 aaPredicted RBP5.4□□□□□ -1.54
LSM3P4-201ENST00000502948 HEATR1Q9H583 2144 aaKnown RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ATRQ13535 2644 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 PLCE1Q9P212 2302 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SERINC4A6NH21 518 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF716A6NP11 495 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 PDLIM1O00151 329 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 NDUFS8O00217 210 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 FAAHO00519 579 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 COPEO14579 308 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF208O43345 1280 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 STX11O75558 287 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SNUPNO95149 360 aaKnown RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 DHRS4L1P0CG22 281 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 UBL4AP11441 157 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 KRT4P19013 534 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 PGCP20142 388 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 IGHV1-2P23083 117 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC7A1P30825 629 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SFTPDP35247 375 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ACVR1BP36896 505 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 HTR3AP46098 478 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 DIO1P49895 249 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 RASGEF1BQ0VAM2 473 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 TP53BP2Q13625 1128 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 LASP1Q14847 261 aaKnown RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 PCLAFQ15004 111 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ARHGAP11BQ3KRB8 267 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 TIGD2Q4W5G0 525 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ATP6AP1LQ52LC2 224 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SYT14P1Q58G82 188 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 C6orf52Q5T4I8 152 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 CLEC6AQ6EIG7 209 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 HMBOX1Q6NT76 420 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 KLHL17Q6TDP4 642 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 KIRREL3Q8IZU9 778 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 RIBC1Q8N443 379 aaPredicted RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF433Q8N7K0 673 aaPredicted RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 KBTBD8Q8NFY9 601 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 OR8J2Q8NGG1 315 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 TWIST2Q8WVJ9 160 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 CDS1Q92903 461 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SH3YL1Q96HL8 342 aaPredicted RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 HS6ST2Q96MM7 605 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 TSSK3Q96PN8 268 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF317Q96PQ6 595 aaPredicted RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 TNFRSF13CQ96RJ3 184 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 RHNO1Q9BSD3 238 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 GATA5Q9BWX5 397 aaPredicted RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ZNF350Q9GZX5 532 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 TMEM185BQ9H7F4 350 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 MOV10Q9HCE1 1003 aaKnown RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 MYOZ1Q9NP98 299 aaPredicted RBP5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SERINC1Q9NRX5 453 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 ACER3Q9NUN7 267 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 TAS2R16Q9NYV7 291 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 TBK1Q9UHD2 729 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 DCTN4Q9UJW0 460 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 B3GALT5Q9Y2C3 310 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC35A3Q9Y2D2 325 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 CARD8Q9Y2G2 431 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 HDGFL3Q9Y3E1 203 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 TRAF6Q9Y4K3 522 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SLC25A15Q9Y619 301 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 MXRA5Q9NR99 2828 aa5.39□□□□□ -1.55
LSM3P4-201ENST00000502948 SONP18583 2426 aaKnown RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 ARFGEF3Q5TH69 2177 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 GTPBP1O00178 669 aaKnown RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 RNASET2O00584 256 aaKnown RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 ABCD4O14678 606 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 CLOCKO15516 846 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 AKAP10O43572 662 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 EIF1BO60739 113 aaKnown RBP5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 ADAM11O75078 769 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 UGT2B17O75795 530 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 NUDT14O95848 222 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 NUDT17P0C025 328 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 LINC00032P0C843 101 aa5.38□□□□□ -1.55
LSM3P4-201ENST00000502948 LAMP1P11279 417 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms