RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 ARSBP15848 533 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 RHCEP18577 417 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 IGFBP5P24593 272 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 POU1F1P28069 291 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 RORAP35398 523 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 SOX6P35712 828 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 NUP62P37198 522 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 PREPP48147 710 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 GIPRP48546 466 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CCT3P49368 545 aaKnown RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 AGFG1P52594 562 aaKnown RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 SMSP52788 366 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 ART1P52961 327 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 BLVRAP53004 296 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 SOX8P57073 446 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 MTPNP58546 118 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 ABATP80404 500 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 TLE4Q04727 773 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 KRT33BQ14525 404 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 SSX1Q16384 188 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 GPR33Q49SQ1 333 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 ZNF678Q5SXM1 525 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 METTL11BQ5VVY1 283 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 KANK2Q63ZY3 851 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 OR4F3Q6IEY1 312 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 SHQ1Q6PI26 577 aaKnown RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 FAM198BQ6UWH4 519 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 TSPYL5Q86VY4 417 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 HIPK1Q86Z02 1210 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 DENND6AQ8IWF6 608 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CNTN4Q8IWV2 1026 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CARFQ8N187 725 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 DPP10Q8N608 796 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CLRN3Q8NCR9 226 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 ZNF431Q8TF32 576 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 TWIST2Q8WVJ9 160 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 GGHQ92820 318 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 GLYATL1Q969I3 302 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 L3HYPDHQ96EM0 354 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 ZBED6CLQ96FA7 236 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 SLC47A1Q96FL8 570 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CSPG4P5Q96PW8 444 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 PELOQ9BRX2 385 aaKnown RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 MARVELD1Q9BSK0 173 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 COPS4Q9BT78 406 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 DPCDQ9BVM2 203 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 TAPBPLQ9BX59 468 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CD244Q9BZW8 370 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 TINAGL1Q9GZM7 467 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 ELOVL6Q9H5J4 265 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 TRIM45Q9H8W5 580 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 C1GALT1Q9NS00 363 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 RAD18Q9NS91 495 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 PLCXD1Q9NUJ7 323 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 IMP3Q9NV31 184 aaKnown RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 AIG1Q9NVV5 245 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 RDH8Q9NYR8 311 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 LEF1Q9UJU2 399 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 HIF3AQ9Y2N7 669 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CLCA3PQ9Y6N3 262 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 MTORP42345 2549 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CNTRLQ7Z7A1 2325 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 A0A1W2PPL8 197 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 PQLC2LA1A4F0 135 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 OR6C74A6NCV1 312 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 ANKRD66B4E2M5 251 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 GTPBP1O00178 669 aaKnown RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 WWP2O00308 870 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 QSOX1O00391 747 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 GNGT2O14610 69 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 ZNF749O43361 778 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 PROM1O43490 865 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 FRS3O43559 492 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 AKAP8O43823 692 aaKnown RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 MFSD11O43934 449 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 SELENOFO60613 162 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 SLC43A1O75387 559 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 KLF7O75840 302 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 MLYCDO95822 493 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 APOC1P02654 83 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 ZNF37AP17032 561 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 TPH1P17752 444 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 LBPP18428 481 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 KRTAP10-9P60411 292 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 PUDPQ08623 228 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 TMEM115Q12893 351 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 CTBP1Q13363 440 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CSHL1Q14406 222 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 FGFBP1Q14512 234 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 FCN2Q15485 313 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 LGALSLQ3ZCW2 172 aaPredicted RBP4.16□□□□□ -1.74
MATR3-202ENST00000502422 FRMPD2BQ6IN97 320 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 PLET1Q6UQ28 207 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 TMEM107Q6UX40 140 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 AMZ2Q86W34 360 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 DNAJC22Q8N4W6 341 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 MS4A15Q8N5U1 240 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 TRAM1L1Q8N609 369 aa4.16□□□□□ -1.74
MATR3-202ENST00000502422 CDYL2Q8N8U2 506 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms