RNA–Protein interactions for RNA: ENST00000499601.2

AC008393.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008393.1, Length 1,454 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008393.1-201ENST00000499601 CDC40O60508 579 aaKnown RBP eCLIP16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 THY1P04216 161 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 NME2P22392 152 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 TNFSF10P50591 281 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 INPP5JQ15735 1006 aaPredicted RBP16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 MICAQ29983 383 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 LPCAT4Q643R3 524 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 ZBTB49Q6ZSB9 765 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 TMEM179BQ7Z7N9 219 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 EPHX4Q8IUS5 362 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 TMEM178AQ8NBL3 297 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 RNF217Q8TC41 542 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 SLC7A13Q8TCU3 470 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 C3orf49Q96BT1 292 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 JSRP1Q96MG2 331 aaPredicted RBP16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 VCXQ9H320 206 aa16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 BOKQ9UMX3 212 aaPredicted RBP16.79■□□□□ 0.28
AC008393.1-201ENST00000499601 ACACAQ13085 2346 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 A0A087WZY1 265 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 ARRDC5A6NEK1 342 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 CBR3O75828 277 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 CCNB2O95067 398 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 ITGB2P05107 769 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 PNMTP11086 282 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 HTR3AP46098 478 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 CXADRP78310 365 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 TOMM34Q15785 309 aaPredicted RBP16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 ZNF766Q5HY98 468 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 IGFL3Q6UXB1 125 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 STK32CQ86UX6 486 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 ZADH2Q8N4Q0 377 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 OR2M7Q8NG81 312 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 GIPC3Q8TF64 312 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 NRG4Q8WWG1 115 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 ACOT11Q8WXI4 607 aaPredicted RBP16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 C1GALT1C1Q96EU7 318 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 SCMH1Q96GD3 660 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 HS6ST2Q96MM7 605 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 FUZQ9BT04 418 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 ADAM19Q9H013 955 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 GABARAPL1Q9H0R8 117 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 DEPPQ9NTK1 212 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 MED17Q9NVC6 651 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 PDP1Q9P0J1 537 aaPredicted RBP16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 FBXL2Q9UKC9 423 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 PCDHGB6Q9Y5F9 930 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 HRH3Q9Y5N1 445 aa16.78■□□□□ 0.28
AC008393.1-201ENST00000499601 URB1O60287 2271 aaKnown RBP16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 TRBV4-1A0A0J9YWV2 114 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 SH3PXD2BA1X283 911 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 B4DXG7 233 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 PEX1O43933 1283 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 LYPD3O95274 346 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 FUT4P22083 530 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 MST1P26927 711 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 VHLP40337 213 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 RBM34P42696 430 aaKnown RBP16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 DLX5P56178 289 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 DSCR4P56555 118 aaPredicted RBP16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 GPR85P60893 370 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 FOXD4Q12950 439 aaPredicted RBP16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 TBR1Q16650 682 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 LRRC36Q1X8D7 754 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 PODNL1Q6PEZ8 512 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 RRM2BQ7LG56 351 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 GRINAQ7Z429 371 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 NKAIN4Q8IVV8 208 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 SULF2Q8IWU5 870 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 PACRGLQ8N7B6 248 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 KLHDC3Q9BQ90 382 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 PSD2Q9BQI7 771 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 PRSS27Q9BQR3 290 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 KLHL4Q9C0H6 718 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 ZFP64Q9NPA5 681 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 KLHL1Q9NR64 748 aa16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 TUBA8Q9NY65 449 aaPredicted RBP16.77■□□□□ 0.28
AC008393.1-201ENST00000499601 HEATR5AQ86XA9 2040 aa16.77■□□□□ 0.27
AC008393.1-201ENST00000499601 ACACBO00763 2458 aa16.77■□□□□ 0.27
AC008393.1-201ENST00000499601 EML6Q6ZMW3 1958 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 FRYQ5TBA9 3013 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 A0A087WUJ7 227 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 A0A087WUU8 490 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 TRAV17A0A0B4J275 112 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 A0A0G2JMM0 328 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 A0A1W2PPB8 328 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 A0A1W2PRS3 328 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 ELOA3DA6NLF2 546 aaPredicted RBP16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 KIR3DP1A8MWS1 328 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 PDLIM1O00151 329 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 ETV2O00321 342 aaPredicted RBP16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 RASAL1O95294 804 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 PRKCAP17252 672 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 TACR3P29371 465 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 POLR2HP52434 150 aaKnown RBP16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 ELOA3BQ3SY89 546 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 OTUD3Q5T2D3 398 aaPredicted RBP16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 PPP4R4Q6NUP7 873 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 ARSKQ6UWY0 536 aa16.76■□□□□ 0.27
AC008393.1-201ENST00000499601 ZNF730Q6ZMV8 503 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms