RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 WDR55Q9H6Y2 383 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 C12orf49Q9H741 205 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 COQ10BQ9H8M1 238 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 TMBIM4Q9HC24 238 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC35A3Q9Y2D2 325 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 GPR45Q9Y5Y3 372 aa7.57□□□□□ -1.2
HMGXB4-207ENST00000498212 A0A1W2PNR3 127 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 CCDC154A6NI56 674 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 DEFB108AA8MXU0 73 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 ETV2O00321 342 aaPredicted RBP7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 SIAH2O43255 324 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 DNAJA2O60884 412 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 PRKD3O94806 890 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 PGRP06401 933 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 PPP3CBP16298 524 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 CD53P19397 219 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 KLK2P20151 261 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 PGM1P36871 562 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 CDKN2CP42773 168 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 ANXA11P50995 505 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 RIPPLY3P57055 190 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 TXNL4AP83876 142 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 MAPK14Q16539 360 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 TIGD2Q4W5G0 525 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 AP1ARQ63HQ0 302 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 NXNQ6DKJ4 435 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 STAC2Q6ZMT1 411 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 FRRS1Q6ZNA5 592 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 ZNF621Q6ZSS3 439 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 EIF3MQ7L2H7 374 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 FCRLAQ7L513 359 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 RNF130Q86XS8 419 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 TUSC5Q8IXB3 177 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 ZNF619Q8N2I2 560 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC43A2Q8N370 569 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 GLB1L3Q8NCI6 653 aaPredicted RBP7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 TMEM234Q8WY98 164 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 ST8SIA1Q92185 356 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 TLCD1Q96CP7 247 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 MAELQ96JY0 434 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 OR52E6Q96RD3 313 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 TMUB1Q9BVT8 246 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 QRSL1Q9H0R6 528 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 MANSC1Q9H8J5 431 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 GP6Q9HCN6 339 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 SERINC1Q9NRX5 453 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 KLHL13Q9P2N7 655 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 CCDC168Q8NDH2 2452 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 AKAP6Q13023 2319 aa7.56□□□□□ -1.2
HMGXB4-207ENST00000498212 SPG11Q96JI7 2443 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 IGHV3-15A0A0B4J1V0 119 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 PRAMEF27A3QJZ7 478 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 HMGN4O00479 90 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 RFXANKO14593 260 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 KLF11O14901 512 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC22A3O75751 556 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 H6PDO95479 791 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 C1QCP02747 245 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 IL6P05231 212 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 GSNP06396 782 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 IDO1P14902 403 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 PSMB1P20618 241 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 ENPP1P22413 925 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 SESN3P58005 492 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 RAC3P60763 192 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 ADAM8P78325 824 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 KCNJ10P78508 379 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 CHRNEQ04844 493 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 MERTKQ12866 999 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 SYPL1Q16563 259 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 GSTA3Q16772 222 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC9B1Q4ZJI4 515 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 PDCD4Q53EL6 469 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 TFAP2EQ6VUC0 442 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 C22orf34Q6ZV56 151 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 PLEKHM3Q6ZWE6 761 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 NUFIP2Q7Z417 695 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 HMGN2P46Q86SG4 172 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 ARFGAP2Q8N6H7 521 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 FAM71CQ8NEG0 241 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 ZNF563Q8TA94 476 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 PIWIL2Q8TC59 973 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 SLC25A43Q8WUT9 341 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 ZG16BQ96DA0 208 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 MARK4Q96L34 752 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 OR5B2Q96R09 309 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 TACO1Q9BSH4 297 aaKnown RBP7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 INPP5KQ9BT40 448 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 OR10A4Q9H209 315 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 ACER3Q9NUN7 267 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 BEX4Q9NWD9 120 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 KLHL9Q9P2J3 617 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 LIPT1Q9Y234 373 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 GPR52Q9Y2T5 361 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 ABCA4P78363 2273 aa7.55□□□□□ -1.2
HMGXB4-207ENST00000498212 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 CLDN24A6NM45 220 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 SULT2B1O00204 365 aa7.54□□□□□ -1.2
HMGXB4-207ENST00000498212 SMAD9O15198 467 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms