RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PLA2G15Q8NCC3 412 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 OR2G2Q8NGZ5 317 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 STT3BQ8TCJ2 826 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 NINJ1Q92982 152 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PNPLA2Q96AD5 504 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SNRNP40Q96DI7 357 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 NOL4LQ96MY1 436 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 OR2A14Q96R47 310 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 THAP7Q9BT49 309 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMEM208Q9BTX3 173 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GGTLC1Q9BX51 225 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SUCNR1Q9BXA5 334 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 OSBPL8Q9BZF1 889 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMX1Q9H3N1 280 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 EHD1Q9H4M9 534 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GAREM1Q9H706 876 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 DECR2Q9NUI1 292 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 OBP2AQ9NY56 170 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 IFNKQ9P0W0 207 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CACNG5Q9UF02 275 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 KCNN3Q9UGI6 736 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CHMP2BQ9UQN3 213 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SCML2Q9UQR0 700 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 BIRC6Q9NR09 4857 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NBPF19A0A087WUL8 3843 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 A0A0U1RQJ8 604 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FRG2CA6NGY1 282 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 HDAC3O15379 428 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SOCS1O15524 211 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 BCAS1O75363 584 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 AGR2O95994 175 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ALPPL2P10696 532 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF32P17041 273 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 XRCC1P18887 633 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 TFEBP19484 476 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PVALBP20472 110 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 RRM1P23921 792 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CRABP1P29762 137 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RNASE4P34096 147 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 SUOXP51687 545 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NANOS2P60321 138 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 MEF2AQ02078 507 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 RCAN2Q14206 197 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TTF1Q15361 905 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ELOCQ15369 112 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 BATFQ16520 125 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SGCAQ16586 387 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FXNQ16595 210 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PFKFB4Q16877 469 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PLPPR5Q32ZL2 321 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TMEM155Q4W5P6 130 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 AKIRIN2Q53H80 203 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RABL3Q5HYI8 236 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LDLRAD1Q5T700 205 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PAQR6Q6TCH4 344 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LRRN1Q6UXK5 716 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GSG1LQ6UXU4 331 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RSPO2Q6UXX9 243 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF620Q6ZNG0 422 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SZRD1Q7Z422 152 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SLC26A11Q86WA9 606 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GLB1L2Q8IW92 636 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SMAP1Q8IYB5 467 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 SHISA5Q8N114 240 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LNX2Q8N448 690 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CBR4Q8N4T8 237 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DCLK2Q8N568 766 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OR51F2Q8NH61 342 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 M1APQ8TC57 530 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZFPM2Q8WW38 1151 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 P2RX5Q93086 422 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 APH1AQ96BI3 265 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DGCR14Q96DF8 476 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 TSPAN17Q96FV3 270 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ACY3Q96HD9 319 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GPATCH3Q96I76 525 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RNF157Q96PX1 679 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CLCC1Q96S66 551 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NAP1L3Q99457 506 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZBTB18Q99592 522 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CCDC77Q9BR77 488 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CINPQ9BW66 212 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 HRH4Q9H3N8 390 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DPEP3Q9H4B8 488 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ABRACLQ9P1F3 81 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 IFT80Q9P2H3 777 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 NAGKQ9UJ70 344 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NAP1L2Q9ULW6 460 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 COL5A1P20908 1838 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 LOC285556D6RIA3 1793 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 PRORSD1PA6NEY8 169 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 WASHC1A8K0Z3 465 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF99A8MXY4 864 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 HSD17B6O14756 317 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TSPAN2O60636 221 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NPIPB7O75200 414 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 AP2A2O94973 939 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 AHSA1O95433 338 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CDS2O95674 445 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms