RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 MUC13Q9H3R2 512 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 TMEM185BQ9H7F4 350 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 SLC7A8Q9UHI5 535 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 SAMD4AQ9UPU9 718 aaKnown RBP10.77□□□□□ -0.69
CUX1-210ENST00000497815 SLC9A8Q9Y2E8 581 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 MRPS18CQ9Y3D5 142 aaKnown RBP10.77□□□□□ -0.69
CUX1-210ENST00000497815 NCKAP5O14513 1909 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 ERICH4A6NGS2 130 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 CPSF4LA6NMK7 179 aaKnown RBP10.76□□□□□ -0.69
CUX1-210ENST00000497815 ACOT8O14734 319 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 SUSD5O60279 629 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 TPST2O60704 377 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 HCN1O60741 890 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 PEPDP12955 493 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 ABOP16442 354 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 BMP7P18075 431 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 IL11P20809 199 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 HTR2AP28223 471 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 TACR3P29371 465 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 EIF1P41567 113 aaKnown RBP10.76□□□□□ -0.69
CUX1-210ENST00000497815 ERFP50548 548 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 GFRA1P56159 465 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 FOXD4Q12950 439 aaPredicted RBP10.76□□□□□ -0.69
CUX1-210ENST00000497815 FLOT2Q14254 428 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 C3AR1Q16581 482 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 TMEM44Q2T9K0 475 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 GLYR1Q49A26 553 aaPredicted RBP10.76□□□□□ -0.69
CUX1-210ENST00000497815 IFI44LQ53G44 452 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 DCST1Q5T197 706 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 WBP2NLQ6ICG8 309 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 LCN8Q6JVE9 175 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 ARHGAP11AQ6P4F7 1023 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 AAGABQ6PD74 315 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 PLEKHM3Q6ZWE6 761 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 FGD2Q7Z6J4 655 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 UBQLNLQ8IYU4 475 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 EID3Q8N140 333 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 GTPBP8Q8N3Z3 284 aaPredicted RBP10.76□□□□□ -0.69
CUX1-210ENST00000497815 ABTB1Q969K4 478 aaPredicted RBP10.76□□□□□ -0.69
CUX1-210ENST00000497815 SLC35B4Q969S0 331 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 MRGPRX4Q96LA9 322 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 ZNF559Q9BR84 538 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 UGT2B28Q9BY64 529 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 ACER3Q9NUN7 267 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 RPS6KB2Q9UBS0 482 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 TESQ9UGI8 421 aaKnown RBP10.76□□□□□ -0.69
CUX1-210ENST00000497815 POMPQ9Y244 141 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 ZNF337Q9Y3M9 751 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 NINQ8N4C6 2090 aa10.76□□□□□ -0.69
CUX1-210ENST00000497815 A0A1B0GVC2 190 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 A0A1B0GWA3 101 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 C7orf72A4D263 438 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 hCG_2039718K7EN88 272 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 FAAHO00519 579 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 AQP7O14520 342 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 SEC14L5O43304 696 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 ACTL6AO96019 429 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 IFNW1P05000 195 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 TPOP07202 933 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 ZNF17P17021 662 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 POU3F2P20265 443 aaPredicted RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 CHMP24386 653 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 PSMA4P25789 261 aaKnown RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 PTGS2P35354 604 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 SLC1A3P43003 542 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 YAP1P46937 504 aaKnown RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 SRYQ05066 204 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 CRYZQ08257 329 aaKnown RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 C19orf57Q0VDD7 668 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 TRAP1Q12931 704 aaKnown RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 MRPL49Q13405 166 aaKnown RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 OR1Q1Q15612 314 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 ENTPD8Q5MY95 495 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 VASNQ6EMK4 673 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 GRINAQ7Z429 371 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 YTHDF3Q7Z739 585 aaKnown RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 ST6GALNAC3Q8NDV1 305 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 OR5M9Q8NGP3 310 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 GEMIN6Q8WXD5 167 aaKnown RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 UTP4Q969X6 686 aaKnown RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 MIB2Q96AX9 1013 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 PYURFQ96I23 114 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 SEPHS2Q99611 448 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 TIMP4Q99727 224 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 TRIM15Q9C019 465 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 TRIM2Q9C040 744 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 AMBRA1Q9C0C7 1298 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 MMADHCQ9H3L0 296 aaPredicted RBP10.75□□□□□ -0.69
CUX1-210ENST00000497815 EVA1AQ9H8M9 152 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 TMEM27Q9HBJ8 222 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 ALKBH4Q9NXW9 302 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 SH3BGRL2Q9UJC5 107 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 ACAD8Q9UKU7 415 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 CNTRLQ7Z7A1 2325 aa10.75□□□□□ -0.69
CUX1-210ENST00000497815 TLN1Q9Y490 2541 aaKnown RBP10.74□□□□□ -0.69
CUX1-210ENST00000497815 TMED7-TICAM2A0A0A6YYA0 188 aa10.74□□□□□ -0.69
CUX1-210ENST00000497815 TCRBV5S2A0A599 114 aa10.74□□□□□ -0.69
CUX1-210ENST00000497815 EFNA2O43921 213 aa10.74□□□□□ -0.69
CUX1-210ENST00000497815 CIB2O75838 187 aa10.74□□□□□ -0.69
CUX1-210ENST00000497815 NTN1O95631 604 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms