RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 GATMP50440 423 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PPT1P50897 306 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PCBP3P57721 371 aaKnown RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 SP140Q13342 867 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 TRAM2Q15035 370 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 AVPI1Q5T686 147 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 SPRYD7Q5W111 196 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 ZNF660Q6AZW8 331 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 TMEM71Q6P5X7 295 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 TSSK4Q6SA08 328 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 DPPA4Q7L190 304 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 KCTD9Q7L273 389 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 FOXRED2Q8IWF2 684 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 LILRB2Q8N423 598 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 ARIH2OSQ8N7S6 290 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR1S2Q8NGQ3 325 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR10R2Q8NGX6 335 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 SYNPRQ8TBG9 265 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PDXPQ96GD0 296 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PTDSS2Q9BVG9 487 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 HCAR1Q9BXC0 346 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 SLITRK2Q9H156 845 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 DMRT3Q9NQL9 472 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 SEMA4GQ9NTN9 838 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 ACSS1Q9NUB1 689 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 ASB6Q9NWX5 421 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 AHSPQ9NZD4 102 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 AKAP7Q9P0M2 348 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PCDHB8Q9UN66 801 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 MBLAC1A4D2B0 266 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 FAM86C2PA6NEL3 165 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 EEF1E1-BLOC1S5C9J1V9 151 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 G3V3Q6 166 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 HMGN4O00479 90 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 RAD1O60671 282 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 GIPP09681 153 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR1D2P34982 312 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 CTSOP43234 321 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 ARTNQ5T4W7 220 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 FAM219AQ8IW50 185 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 SVBPQ8N300 66 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR1M1Q8NGA1 313 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 BRIX1Q8TDN6 353 aaKnown RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 ZNF480Q8WV37 535 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 NR4A3Q92570 626 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 OSTF1Q92882 214 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 NKD1Q969G9 470 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 DNAJA3Q96EY1 480 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 RSRP1Q9BUV0 290 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 HRH4Q9H3N8 390 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 MEPEQ9NQ76 525 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PCOLCE2Q9UKZ9 415 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PCDHGA5Q9Y5G8 931 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 DSPPQ9NZW4 1301 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 CXCL11O14625 94 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 MAS1P04201 325 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 HMGN1P05114 100 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 NDUFV2P19404 249 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PTBP1P26599 531 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 NTSP30990 170 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 RAB5BP61020 215 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PRAMEF17Q5VTA0 474 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 TXNDC8Q6A555 127 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR7E24Q6IFN5 339 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 GDF6Q6KF10 455 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 Q6ZVU0 165 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 TMPRSS12Q86WS5 348 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 ARL14EPQ8N8R7 260 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR5T2Q8NGG2 359 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR5M9Q8NGP3 310 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 S100A16Q96FQ6 103 aaKnown RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 JAM3Q9BX67 310 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 USP36Q9P275 1121 aaKnown RBP9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 PCDHB10Q9UN67 800 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 FAM96BQ9Y3D0 163 aa9.88□□□□□ -0.83
TRAPPC12-223ENST00000497597 A0A1B0GV50 99 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 MYADML2A6NDP7 307 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 H7BY64 318 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 TGM6O95932 706 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 ATP1B1P05026 303 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 GKN3PP0CG01 181 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 IFNGR1P15260 489 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 VAMP1P23763 118 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 MPIP34949 423 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 CENPAP49450 140 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 ST3GAL3Q11203 375 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 CHST14Q8NCH0 376 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR14A16Q8NHC5 309 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 PRAP1Q96NZ9 151 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 ZMAT3Q9HA38 289 aaKnown RBP9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 TRPV4Q9HBA0 871 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 NDRG3Q9UGV2 375 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 TAC3Q9UHF0 121 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 ZNF230Q9UIE0 474 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 GPR55Q9Y2T6 319 aaPredicted RBP9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 TRAV27A0A087WT01 109 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 NPIPA5A0A0B4J1W7 369 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 NPIPA7E9PJI5 369 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 OR1F1O43749 312 aa9.87□□□□□ -0.83
TRAPPC12-223ENST00000497597 LCMT2O60294 686 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms