RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 SESN3P58005 492 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 MERTKQ12866 999 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 SCARB2Q14108 478 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 ZNF311Q5JNZ3 666 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 RPS26P11Q5JNZ5 115 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 REP15Q6BDI9 236 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 SP5Q6BEB4 398 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 GRINAQ7Z429 371 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 HMGN2P46Q86SG4 172 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 SNX32Q86XE0 403 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 C9orf106Q8NAJ2 232 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 C11orf65Q8NCR3 313 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 HIPK4Q8NE63 616 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 BHLHE22Q8NFJ8 381 aaPredicted RBP17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 NFKBIDQ8NI38 313 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 RP9Q8TA86 221 aaKnown RBP17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 CNOT9Q92600 299 aaKnown RBP17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 MAL2Q969L2 176 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 SLC35B4Q969S0 331 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 KLHDC3Q9BQ90 382 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 PRRG4Q9BZD6 226 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 PCNX1Q96RV3 2341 aa17.32■□□□□ 0.36
CTDSP1-213ENST00000496785 MED12Q93074 2177 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 LOC100653049A0A140TA62 436 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 CDHR4A6H8M9 788 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 CFAP73A6NFT4 308 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 CLDN24A6NM45 220 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 FBP2O00757 339 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 SERPINB7O75635 380 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 KRT34O76011 436 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 PABPC4LP0CB38 370 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 BMP5P22003 454 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 SLC7A1P30825 629 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 ZNF136P52737 540 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 DLX5P56178 289 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 PON3Q15166 354 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 CDSNQ15517 529 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 HBMQ6B0K9 141 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 ZNF836Q6ZNA1 936 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 PLEKHM3Q6ZWE6 761 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 SERPINA11Q86U17 422 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 VRK2Q86Y07 508 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 OR8J3Q8NGG0 315 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 OR10D3Q8NH80 312 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 LRRC58Q96CX6 371 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 REXO5Q96IC2 774 aaKnown RBP17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 ADGRG7Q96K78 797 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 NPAS1Q99742 590 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 IKZF5Q9H5V7 419 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 TMEM185BQ9H7F4 350 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 SLC24A3Q9HC58 644 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 PCNX3Q9H6A9 2034 aa17.31■□□□□ 0.36
CTDSP1-213ENST00000496785 COL12A1Q99715 3063 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 HECTD1Q9ULT8 2610 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 KDM4EB2RXH2 506 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 H0YC42 278 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 SNX3O60493 162 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 DRD4P21917 467 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 PRKAR1BP31321 381 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 SFTPDP35247 375 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 PEX19P40855 299 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 ASCL1P50553 236 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 MAP2K6P52564 334 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 TPD52P55327 224 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 MTPNP58546 118 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 COPZ1P61923 177 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 EPS8Q12929 822 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 INTS11Q5TA45 600 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 GTF2IRD2BQ6EKJ0 949 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 GTF2IRD2Q86UP8 949 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 NAXEQ8NCW5 288 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 CPNE4Q96A23 557 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 KAT8Q9H7Z6 458 aaKnown RBP17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 EVA1AQ9H8M9 152 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 ARMCX1Q9P291 453 aa17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 FOXD3Q9UJU5 478 aaPredicted RBP17.3■□□□□ 0.36
CTDSP1-213ENST00000496785 FLNBO75369 2602 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 A0A0J9YW62 118 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 NKX2-6A6NCS4 301 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 TNFSF11O14788 317 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 HNRNPRO43390 633 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 CXCL13O43927 109 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 COX6B1P14854 86 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 IDH2P48735 452 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 CARD18P57730 90 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 CAPRIN1Q14444 709 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 CTU2Q2VPK5 515 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 TMEM176BQ3YBM2 270 aaPredicted RBP17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 NANOGP8Q6NSW7 305 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 PPP4R4Q6NUP7 873 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 NET1Q7Z628 596 aaPredicted RBP17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 ARPINQ7Z6K5 226 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 MTDHQ86UE4 582 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 FNDC9Q8TBE3 224 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 FIG4Q92562 907 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 OSTF1Q92882 214 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 INTS12Q96CB8 462 aaKnown RBP17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 UCK2Q9BZX2 261 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 PIGMQ9H3S5 423 aa17.29■□□□□ 0.36
CTDSP1-213ENST00000496785 NANOGQ9H9S0 305 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms