RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SMAD2Q15796 467 aaKnown RBP12.02□□□□□ -0.49
GARNL3-220ENST00000496711 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.02□□□□□ -0.49
GARNL3-220ENST00000496711 KLHL12Q53G59 568 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 ARHGAP11AQ6P4F7 1023 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 OGFOD3Q6PK18 319 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 KIRREL2Q6UWL6 708 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 LINC00114Q6XXX2 140 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 OAFQ86UD1 273 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 SDR16C5Q8N3Y7 309 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 ARIH2OSQ8N7S6 290 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 ZNF615Q8N8J6 731 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 SLC37A3Q8NCC5 494 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 ATP6V1C2Q8NEY4 427 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 OR4C6Q8NH72 309 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 AP3S1Q92572 193 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 ZDHHC12Q96GR4 267 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 HSPA12BQ96MM6 686 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 KATNB1Q9BVA0 655 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 ALG8Q9BVK2 526 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 TMED9Q9BVK6 235 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 FOXQ1Q9C009 403 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 SPRTNQ9H040 489 aaPredicted RBP12.02□□□□□ -0.49
GARNL3-220ENST00000496711 INPP5EQ9NRR6 644 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 PRODH2Q9UF12 536 aa12.02□□□□□ -0.49
GARNL3-220ENST00000496711 ZC3H12DA2A288 527 aaKnown RBP12.01□□□□□ -0.49
GARNL3-220ENST00000496711 CCDC182A6NF36 153 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 SERINC4A6NH21 518 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 EFCAB7A8K855 629 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 RHPN2P1A8MT19 583 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 CSTAP01040 98 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 CLPSP04118 112 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 GAAP10253 952 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 GPR143P51810 404 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 RPS7P62081 194 aaKnown RBP12.01□□□□□ -0.49
GARNL3-220ENST00000496711 BIKQ13323 160 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 B3GLCTQ6Y288 498 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 KLBQ86Z14 1044 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 TMEM99Q8N816 258 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 ITPKCQ96DU7 683 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 PHOX2BQ99453 314 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 TBC1D17Q9HA65 648 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 MCCC2Q9HCC0 563 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 ASB6Q9NWX5 421 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 LRIT1Q9P2V4 623 aa12.01□□□□□ -0.49
GARNL3-220ENST00000496711 TMEM265A0A087WTH1 108 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 C17orf105B2RV13 164 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 GABRPO00591 440 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 IFNGP01579 166 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 HK1P19367 917 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 SLC2A5P22732 501 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 CRMP1Q14194 572 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 NDUFAF6Q330K2 333 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 DDI2Q5TDH0 399 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 NKAIN2Q5VXU1 208 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 FCRLBQ6BAA4 426 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 VASNQ6EMK4 673 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 RTL4Q6ZR62 310 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 OR7G1Q8NGA0 311 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 TMCO6Q96DC7 493 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 TNFRSF13CQ96RJ3 184 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 ABCB9Q9NP78 766 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 MKKSQ9NPJ1 570 aaPredicted RBP12□□□□□ -0.49
GARNL3-220ENST00000496711 CUTCQ9NTM9 273 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 C14orf119Q9NWQ9 140 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 GMEB2Q9UKD1 530 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 POLHQ9Y253 713 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 MPDZO75970 2070 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 DAPL1A0PJW8 107 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 CASKO14936 926 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 APOA1P02647 267 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 PEPDP12955 493 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 GALP22466 123 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 NOS3P29474 1203 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 SLC16A1P53985 500 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 GPR50Q13585 617 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 FHL1Q13642 323 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 GALEQ14376 348 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 CCDC85BQ15834 202 aaPredicted RBP12□□□□□ -0.49
GARNL3-220ENST00000496711 ZNF79Q15937 498 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 MARCH9Q86YJ5 346 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 ZNF440Q8IYI8 595 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 ABCA7Q8IZY2 2146 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 OR8H2Q8N162 312 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 FAM181AQ8N9Y4 354 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 OR10H4Q8NGA5 316 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 SETD6Q8TBK2 473 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 DNAJA4Q8WW22 397 aaPredicted RBP12□□□□□ -0.49
GARNL3-220ENST00000496711 PTP4A1Q93096 173 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 SGTBQ96EQ0 304 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 LRFN5Q96NI6 719 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 DCLRE1CQ96SD1 692 aaKnown RBP12□□□□□ -0.49
GARNL3-220ENST00000496711 TBX5Q99593 518 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 TEAD3Q99594 435 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 SRRQ9GZT4 340 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 OR51V1Q9H2C8 321 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 MIXL1Q9H2W2 232 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 ISG20L2Q9H9L3 353 aaKnown RBP12□□□□□ -0.49
GARNL3-220ENST00000496711 TRIM36Q9NQ86 728 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 LANCL2Q9NS86 450 aa12□□□□□ -0.49
GARNL3-220ENST00000496711 UCKL1Q9NWZ5 548 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms