RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 SLC35A5Q9BS91 424 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 THUMPD3Q9BV44 507 aaKnown RBP12.71□□□□□ -0.37
VTI1A-209ENST00000496445 ACTR6Q9GZN1 396 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 SAP130Q9H0E3 1048 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 GSX1Q9H4S2 264 aaPredicted RBP12.71□□□□□ -0.37
VTI1A-209ENST00000496445 TIGARQ9NQ88 270 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 EXD2Q9NVH0 621 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 PCDHGB4Q9UN71 923 aa12.71□□□□□ -0.37
VTI1A-209ENST00000496445 TMEM120BA0PK00 339 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 HMGN4O00479 90 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 CYP7B1O75881 506 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 GUSBP08236 651 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 PABPC4LP0CB38 370 aaKnown RBP12.7□□□□□ -0.38
VTI1A-209ENST00000496445 UBTFL6P0CB48 400 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-209ENST00000496445 PSMB1P20618 241 aaKnown RBP12.7□□□□□ -0.38
VTI1A-209ENST00000496445 EPHA3P29320 983 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 KHKP50053 298 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 HHATQ5VTY9 493 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 AP1ARQ63HQ0 302 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 C3orf33Q6P1S2 294 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 GABRG1Q8N1C3 465 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 XAGE5Q8WWM1 108 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 ST8SIA1Q92185 356 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 ROPN1LQ96C74 230 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 ZG16BQ96DA0 208 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 PIP5K1AQ99755 562 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 PSD2Q9BQI7 771 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 MARCOQ9UEW3 520 aaPredicted RBP12.7□□□□□ -0.38
VTI1A-209ENST00000496445 BTNL2Q9UIR0 455 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 WDR45Q9Y484 360 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 DNHD1Q96M86 4753 aa12.7□□□□□ -0.38
VTI1A-209ENST00000496445 NAV3Q8IVL0 2385 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 GOLGA8QA0A0J9YX86 632 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 GOLGA8OA6NCC3 632 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 CLDN24A6NM45 220 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 GOLGA8NF8WBI6 632 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 SMAD9O15198 467 aaKnown RBP12.69□□□□□ -0.38
VTI1A-209ENST00000496445 ADAM11O75078 769 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 PRKD3O94806 890 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 AGR2O95994 175 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 EDNRAP25101 427 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 SLC7A1P30825 629 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 S100A3P33764 101 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 CDKN2CP42773 168 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 SESN3P58005 492 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 RAC3P60763 192 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 NKX6-1P78426 367 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-209ENST00000496445 TSC22D1Q15714 1073 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 BEX5Q5H9J7 111 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 TMEM201Q5SNT2 666 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 ATAD3BQ5T9A4 648 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 C20orf204Q6ZNR8 217 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 PLEKHM3Q6ZWE6 761 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 EIF3MQ7L2H7 374 aaKnown RBP12.69□□□□□ -0.38
VTI1A-209ENST00000496445 CROCCP2Q86T23 111 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 STK32CQ86UX6 486 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 RNF130Q86XS8 419 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 WFDC8Q8IUA0 241 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 ZNF619Q8N2I2 560 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 VPS37AQ8NEZ2 397 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 MGARPQ8TDB4 240 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 IGFBPL1Q8WX77 278 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 S100PBPQ96BU1 408 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 REXO5Q96IC2 774 aaKnown RBP12.69□□□□□ -0.38
VTI1A-209ENST00000496445 CCL19Q99731 98 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 INPP5KQ9BT40 448 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 OR10A4Q9H209 315 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 WDR55Q9H6Y2 383 aaPredicted RBP12.69□□□□□ -0.38
VTI1A-209ENST00000496445 BCO1Q9HAY6 547 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 GP6Q9HCN6 339 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 POLE3Q9NRF9 147 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 GPR52Q9Y2T5 361 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 GPR45Q9Y5Y3 372 aa12.69□□□□□ -0.38
VTI1A-209ENST00000496445 ZNF814B7Z6K7 855 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 CYTIPO60759 359 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 PLAUP00749 431 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 PGRP06401 933 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 YES1P07947 543 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 KITP10721 976 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 FOSL1P15407 271 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 PGCP20142 388 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 FPR1P21462 350 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 CHI3L1P36222 383 aaPredicted RBP12.68□□□□□ -0.38
VTI1A-209ENST00000496445 CHRNEQ04844 493 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 MERTKQ12866 999 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 SYPL1Q16563 259 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 Q5PR19 223 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 ZNF704Q6ZNC4 412 aaPredicted RBP12.68□□□□□ -0.38
VTI1A-209ENST00000496445 MAVSQ7Z434 540 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 SPATA19Q7Z5L4 167 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 LRRC75A-AS1Q8N1F1 130 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 ANKFN1Q8N957 763 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 OIT3Q8WWZ8 545 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 PLPPR2Q96GM1 343 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 POM121Q96HA1 1249 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 OR5B2Q96R09 309 aa12.68□□□□□ -0.38
VTI1A-209ENST00000496445 ZNF300Q96RE9 604 aaPredicted RBP12.68□□□□□ -0.38
VTI1A-209ENST00000496445 SMR3AQ99954 134 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms