RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 LRTOMTQ8WZ04 291 aa13.66□□□□□ -0.22
GAPDH-210ENST00000496049 CENPNQ96H22 339 aaPredicted RBP13.66□□□□□ -0.22
GAPDH-210ENST00000496049 JSRP1Q96MG2 331 aaPredicted RBP13.66□□□□□ -0.22
GAPDH-210ENST00000496049 FAM173AQ9BQD7 235 aa13.66□□□□□ -0.22
GAPDH-210ENST00000496049 RASSF4Q9H2L5 321 aa13.66□□□□□ -0.22
GAPDH-210ENST00000496049 SAMHD1Q9Y3Z3 626 aaKnown RBP13.66□□□□□ -0.22
GAPDH-210ENST00000496049 TESMINQ9Y4I5 508 aa13.66□□□□□ -0.22
GAPDH-210ENST00000496049 TRAV17A0A0B4J275 112 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 TRAPPC13A5PLN9 417 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 KLRC4-KLRK1H3BQV0 150 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 GMFGO60234 142 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 NME2P1O60361 137 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 GADD45GO95257 159 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 H1F0P07305 194 aaKnown RBP13.65□□□□□ -0.22
GAPDH-210ENST00000496049 PRG2P13727 222 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 CNR1P21554 472 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 NME2P22392 152 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 RRM2P31350 389 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 YAP1P46937 504 aaKnown RBP13.65□□□□□ -0.22
GAPDH-210ENST00000496049 ZNF136P52737 540 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 CDH12P55289 794 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 SESN3P58005 492 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 HOXC5Q00444 222 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 PLAURQ03405 335 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 SLC34A1Q06495 639 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 GANABQ14697 944 aaKnown RBP13.65□□□□□ -0.22
GAPDH-210ENST00000496049 FGD3Q5JSP0 725 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
GAPDH-210ENST00000496049 WBP2NLQ6ICG8 309 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 CBLN3Q6UW01 205 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 PLCZ1Q86YW0 608 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 OR4D11Q8NGI4 311 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 ADAMTS16Q8TE57 1224 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 DNAJA4Q8WW22 397 aaPredicted RBP13.65□□□□□ -0.22
GAPDH-210ENST00000496049 ARSGQ96EG1 525 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 FRMD6Q96NE9 622 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 SIGLEC12Q96PQ1 595 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 PKP2Q99959 881 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 RSPO3Q9BXY4 272 aaPredicted RBP13.65□□□□□ -0.22
GAPDH-210ENST00000496049 RTN4RQ9BZR6 473 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 ANKRD19PQ9H560 264 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 STOML1Q9UBI4 398 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 DKKL1Q9UK85 242 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 TMCC3Q9ULS5 477 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 ICAM5Q9UMF0 924 aa13.65□□□□□ -0.22
GAPDH-210ENST00000496049 MTORP42345 2549 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 CELSR1Q9NYQ6 3014 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 A0A087WZY1 265 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 G3V3Y1 287 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 TNFRSF11BO00300 401 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 GNB5O14775 395 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 OIP5O43482 229 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 DIRAS1O95057 198 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 AGFG2O95081 481 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 SP1P08047 785 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 COL8A1P27658 744 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 HTR2AP28223 471 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 ACAA2P42765 397 aaKnown RBP13.64□□□□□ -0.23
GAPDH-210ENST00000496049 IDH2P48735 452 aaKnown RBP13.64□□□□□ -0.23
GAPDH-210ENST00000496049 TNFSF10P50591 281 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 TRAM2Q15035 370 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 OR1Q1Q15612 314 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 SNCBQ16143 134 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 ZNF766Q5HY98 468 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 SLC25A25Q6KCM7 469 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 ULK3Q6PHR2 472 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 ZNF227Q86WZ6 799 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 SVOPLQ8N434 492 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 LSMEM1Q8N8F7 131 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 OR2M3Q8NG83 312 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 RNF217Q8TC41 542 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 ST8SIA1Q92185 356 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 SLC41A3Q96GZ6 507 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 EPYCQ99645 322 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 VCXQ9H320 206 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 VCX3BQ9H321 246 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 KRCC1Q9NPI7 259 aaPredicted RBP13.64□□□□□ -0.23
GAPDH-210ENST00000496049 KLHL1Q9NR64 748 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 CTPS2Q9NRF8 586 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 TAS2R10Q9NYW0 307 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 MED11Q9P086 117 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 RIMS3Q9UJD0 308 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 ACAD8Q9UKU7 415 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 A4GNTQ9UNA3 340 aa13.64□□□□□ -0.23
GAPDH-210ENST00000496049 A0A1B0GWA3 101 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 A0A1W2PRQ8 180 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 J3KTA2 159 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 ACOT7O00154 380 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 CHP2O43745 196 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 CDC40O60508 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
GAPDH-210ENST00000496049 TRIM3O75382 744 aaPredicted RBP13.63□□□□□ -0.23
GAPDH-210ENST00000496049 PNMTP11086 282 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 ZNF23P17027 643 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 DNAJA1P31689 397 aaKnown RBP13.63□□□□□ -0.23
GAPDH-210ENST00000496049 SLC1A3P43003 542 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 HTR3AP46098 478 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 DNASE1L1P49184 302 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 GPR85P60893 370 aa13.63□□□□□ -0.23
GAPDH-210ENST00000496049 PIN1Q13526 163 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms