RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 STACQ99469 402 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 SLC35A5Q9BS91 424 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 TMEM204Q9BSN7 226 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 PINK1Q9BXM7 581 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 RTN4RQ9BZR6 473 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 MMADHCQ9H3L0 296 aaPredicted RBP7.89□□□□□ -1.15
SORT1-208ENST00000495777 DSN1Q9H410 356 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 HHATLQ9HCP6 504 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 SPAG4Q9NPE6 437 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 ZCCHC3Q9NUD5 404 aaKnown RBP7.89□□□□□ -1.15
SORT1-208ENST00000495777 PPP4R1LQ9P1A2 415 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 MRTO4Q9UKD2 239 aaKnown RBP7.89□□□□□ -1.15
SORT1-208ENST00000495777 FAF1Q9UNN5 650 aaPredicted RBP7.89□□□□□ -1.15
SORT1-208ENST00000495777 ZNF337Q9Y3M9 751 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 SNX8Q9Y5X2 465 aa7.89□□□□□ -1.15
SORT1-208ENST00000495777 MXRA5Q9NR99 2828 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 RAI1Q7Z5J4 1906 aaPredicted RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 IGLV3-32A0A0A0MS00 114 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 SCO2O43819 266 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 CRLF1O75462 422 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 AQP8O94778 261 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 CPSF4O95639 269 aaKnown RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 FCGR2AP12318 317 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 IL11P20809 199 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 TBXA2RP21731 343 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 TCEA1P23193 301 aaKnown RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 LCN1P31025 176 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 KHKP50053 298 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 PSMD4P55036 377 aaKnown RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 PHC1P78364 1004 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 BNIP1Q12981 228 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 PON3Q15166 354 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 CYP27C1Q4G0S4 372 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 SLC2A7Q6PXP3 512 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 TMEM107Q6UX40 140 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 STAC2Q6ZMT1 411 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 ZNF704Q6ZNC4 412 aaPredicted RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 ZNF551Q7Z340 670 aaPredicted RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 GGNQ86UU5 652 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 ANKRD46Q86W74 232 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 CLECL1Q8IZS7 167 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 PGAM4Q8N0Y7 254 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 ZNF611Q8N823 705 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 NUP43Q8NFH3 380 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 OR6K3Q8NGY3 331 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 MIPOL1Q8TD10 442 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 ZFP90Q8TF47 636 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 PMM1Q92871 262 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 POP5Q969H6 163 aaKnown RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 RCN3Q96D15 328 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 FAM120BQ96EK7 910 aaKnown RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 C1GALT1C1Q96EU7 318 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 ANKRD27Q96NW4 1050 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 CGREF1Q99674 301 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 ACTRT3Q9BYD9 372 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 PAIP1Q9H074 479 aaKnown RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 OR10A4Q9H209 315 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 TPT1P8Q9HAU6 139 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 SDHAF3Q9NRP4 125 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 PLSCR4Q9NRQ2 329 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 DUSP22Q9NRW4 184 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 SIRT3Q9NTG7 399 aaPredicted RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 EXD2Q9NVH0 621 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 FLRT3Q9NZU0 649 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 MED11Q9P086 117 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 PRPF19Q9UMS4 504 aaKnown RBP7.88□□□□□ -1.15
SORT1-208ENST00000495777 PROCRQ9UNN8 238 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 LIPT1Q9Y234 373 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 PCDHB14Q9Y5E9 798 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 AP4B1Q9Y6B7 739 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 MED12LQ86YW9 2145 aa7.88□□□□□ -1.15
SORT1-208ENST00000495777 TRBV5-3A0A0A0MS03 114 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 C9JVG2 144 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 CLIC1O00299 241 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 UPK1AO00322 258 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 FBP2O00757 339 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 HS3ST1O14792 307 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 AIM2O14862 343 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 SEC14L5O43304 696 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 RRP9O43818 475 aaKnown RBP7.87□□□□□ -1.15
SORT1-208ENST00000495777 SS18L1O75177 396 aaPredicted RBP7.87□□□□□ -1.15
SORT1-208ENST00000495777 UBOX5O94941 541 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 GUSBP08236 651 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 GPX2P18283 190 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 KCNJ5P48544 419 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 NR1H2P55055 460 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 RPS3AP61247 264 aaKnown RBP7.87□□□□□ -1.15
SORT1-208ENST00000495777 RBBP4Q09028 425 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.87□□□□□ -1.15
SORT1-208ENST00000495777 PAGE3Q5JUK9 113 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 ATAD3BQ5T9A4 648 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 SAXO2Q658L1 398 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 ANKRD34AQ69YU3 496 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 CDC73Q6P1J9 531 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 ERICH5Q6P6B1 374 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 DLEU7Q6UYE1 221 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 SZRD1Q7Z422 152 aa7.87□□□□□ -1.15
SORT1-208ENST00000495777 SERPINA11Q86U17 422 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms