RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 BST1Q10588 318 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 MAD2L1Q13257 205 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-208ENST00000494728 TAB1Q15750 504 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 ARHGAP11BQ3KRB8 267 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 TIGD2Q4W5G0 525 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 SHEQ5VZ18 495 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 SAXO2Q658L1 398 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 ALKBH2Q6NS38 261 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 FRRS1Q6ZNA5 592 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 C20orf204Q6ZNR8 217 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 BEND4Q6ZU67 534 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 YTHDF3Q7Z739 585 aaKnown RBP10.34□□□□□ -0.75
VTI1A-208ENST00000494728 NATD1Q8N6N6 113 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 OR4A15Q8NGL6 344 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 LILRB1Q8NHL6 650 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-208ENST00000494728 MIPOL1Q8TD10 442 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 NEUROG1Q92886 237 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 PIGTQ969N2 578 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 ZNF775Q96BV0 537 aaPredicted RBP10.34□□□□□ -0.75
VTI1A-208ENST00000494728 ZG16BQ96DA0 208 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 ZIM3Q96PE6 472 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 PRPF18Q99633 342 aaKnown RBP10.34□□□□□ -0.75
VTI1A-208ENST00000494728 HOXD1Q9GZZ0 328 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 HHATLQ9HCP6 504 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 GLRX2Q9NS18 164 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 PRSS50Q9UI38 385 aa10.34□□□□□ -0.75
VTI1A-208ENST00000494728 HEATR1Q9H583 2144 aaKnown RBP10.33□□□□□ -0.76
VTI1A-208ENST00000494728 H3BNH8 94 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 SDHDO14521 159 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 EIF4E2O60573 245 aaKnown RBP10.33□□□□□ -0.76
VTI1A-208ENST00000494728 STX11O75558 287 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 CYP7B1O75881 506 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 CPSF4O95639 269 aaKnown RBP10.33□□□□□ -0.76
VTI1A-208ENST00000494728 LY6G6DO95868 133 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 FPR1P21462 350 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 IL12AP29459 219 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 ADSLP30566 484 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-208ENST00000494728 PGM1P36871 562 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 CDKN2CP42773 168 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 PTH2RP49190 550 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 SESN3P58005 492 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 CBFBQ13951 182 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 CASP8Q14790 479 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 RNPS1Q15287 305 aaKnown RBP10.33□□□□□ -0.76
VTI1A-208ENST00000494728 SMU1Q2TAY7 513 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 FAM174BQ3ZCQ3 159 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 PDSS1Q5T2R2 415 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 CLEC9AQ6UXN8 241 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 P3H2Q8IVL5 708 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 TOR1AIP2Q8NFQ8 470 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 ZNF75CPQ92670 426 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-208ENST00000494728 TESCQ96BS2 214 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 OR5B2Q96R09 309 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 DPY30Q9C005 99 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 LAT2Q9GZY6 243 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 BCO1Q9HAY6 547 aa10.33□□□□□ -0.76
VTI1A-208ENST00000494728 SSU72Q9NP77 194 aaKnown RBP10.33□□□□□ -0.76
VTI1A-208ENST00000494728 HMGN4O00479 90 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 AP3D1O14617 1153 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 HS3ST1O14792 307 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 SMAD7O15105 426 aaKnown RBP10.32□□□□□ -0.76
VTI1A-208ENST00000494728 TM9SF1O15321 606 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 RAMP1O60894 148 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 LYZL6O75951 148 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 PRKD3O94806 890 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 ADAP00813 363 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 CSTAP01040 98 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 HEXAP06865 529 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 FESP07332 822 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 MYZAPP0CAP1 466 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 PPP3CBP16298 524 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 SLC7A1P30825 629 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 NTF4P34130 210 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 RPL14P50914 215 aaKnown RBP10.32□□□□□ -0.76
VTI1A-208ENST00000494728 WDR4P57081 412 aaKnown RBP10.32□□□□□ -0.76
VTI1A-208ENST00000494728 RAC3P60763 192 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 UFM1P61960 85 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 CAPRIN1Q14444 709 aaKnown RBP10.32□□□□□ -0.76
VTI1A-208ENST00000494728 TMEM201Q5SNT2 666 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 CEP85LQ5SZL2 805 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 SFRP5Q5T4F7 317 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 ABLIM2Q6H8Q1 611 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 C3orf33Q6P1S2 294 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 BHLHB9Q6PI77 547 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 PLEKHM3Q6ZWE6 761 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 C16orf62Q7Z3J2 963 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 STK32CQ86UX6 486 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 HOMEZQ8IX15 550 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 ANKFN1Q8N957 763 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 KBTBD8Q8NFY9 601 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 XAGE5Q8WWM1 108 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 ST8SIA1Q92185 356 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 ROPN1LQ96C74 230 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 NEURL3Q96EH8 262 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 ARL5BQ96KC2 179 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 SLC35A5Q9BS91 424 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 INPP5KQ9BT40 448 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 CCDC106Q9BWC9 280 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 GSX2Q9BZM3 304 aa10.32□□□□□ -0.76
VTI1A-208ENST00000494728 OR11A1Q9GZK7 315 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms